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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>20665_20665_1_CUL3-DARS_CUL3_chr2_225378241_ENST00000264414_DARS_chr2_136670136_ENST00000264161_length(amino acids)=336AA_BP=218
MSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVR
EDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDR
GAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDP

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>20665_20665_2_CUL3-DARS_CUL3_chr2_225378241_ENST00000264414_DARS_chr2_136670136_ENST00000537273_length(amino acids)=336AA_BP=218
MSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVR
EDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDR
GAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDP

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>20665_20665_3_CUL3-DARS_CUL3_chr2_225378241_ENST00000344951_DARS_chr2_136670136_ENST00000264161_length(amino acids)=270AA_BP=152
MSNLSKGTGSRKDTKMRIRAFPVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQYDTDFYILDKYPLAVRPFYTMPDPRNPK
QSNSYDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP

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>20665_20665_4_CUL3-DARS_CUL3_chr2_225378241_ENST00000344951_DARS_chr2_136670136_ENST00000537273_length(amino acids)=270AA_BP=152
MSNLSKGTGSRKDTKMRIRAFPVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQYDTDFYILDKYPLAVRPFYTMPDPRNPK
QSNSYDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP

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>20665_20665_5_CUL3-DARS_CUL3_chr2_225378241_ENST00000409096_DARS_chr2_136670136_ENST00000264161_length(amino acids)=342AA_BP=224
MLRIHFFSFSFNLSHDVVLSVITEPSRCMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEH
LINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERK
GEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGA

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>20665_20665_6_CUL3-DARS_CUL3_chr2_225378241_ENST00000409096_DARS_chr2_136670136_ENST00000537273_length(amino acids)=342AA_BP=224
MLRIHFFSFSFNLSHDVVLSVITEPSRCMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEH
LINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERK
GEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGA

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