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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>21055_21055_1_CYP2E1-AMACR_CYP2E1_chr10_135342144_ENST00000252945_AMACR_chr5_34006004_ENST00000335606_length(amino acids)=412AA_BP=112
MSALGVTVALLVWAAFLLLVSMWRQVHSSWNLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEAL
LDYKDEFSGRGDLPAFHAHRDRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLL
ADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQF
YELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHHDHNKERGSFITSEEQDVSPRPAPL

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>21055_21055_2_CYP2E1-AMACR_CYP2E1_chr10_135342144_ENST00000252945_AMACR_chr5_34006004_ENST00000382072_length(amino acids)=228AA_BP=112
MSALGVTVALLVWAAFLLLVSMWRQVHSSWNLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEAL
LDYKDEFSGRGDLPAFHAHRDRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRLAGHDINYLALSGGRNSIFKFFSVENSEIESV

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>21055_21055_3_CYP2E1-AMACR_CYP2E1_chr10_135342144_ENST00000463117_AMACR_chr5_34006004_ENST00000335606_length(amino acids)=436AA_BP=136
MAPFMWQVVIQDCLPGWQQGPSGTMSALGVTVALLVWAAFLLLVSMWRQVHSSWNLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGP
VFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRLAGHDINY
LALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGG
APFYTTYRTADGEFMAVGAIEPQFYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHH

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>21055_21055_4_CYP2E1-AMACR_CYP2E1_chr10_135342144_ENST00000463117_AMACR_chr5_34006004_ENST00000382072_length(amino acids)=252AA_BP=136
MAPFMWQVVIQDCLPGWQQGPSGTMSALGVTVALLVWAAFLLLVSMWRQVHSSWNLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGP
VFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRLAGHDINY

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