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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>21162_21162_1_CYTH3-MAD1L1_CYTH3_chr7_6210165_ENST00000350796_MAD1L1_chr7_1938026_ENST00000265854_length(amino acids)=425AA_BP=309
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEEL
LRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTS

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>21162_21162_2_CYTH3-MAD1L1_CYTH3_chr7_6210165_ENST00000350796_MAD1L1_chr7_1938026_ENST00000399654_length(amino acids)=425AA_BP=309
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEEL
LRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTS

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>21162_21162_3_CYTH3-MAD1L1_CYTH3_chr7_6210165_ENST00000350796_MAD1L1_chr7_1938026_ENST00000402746_length(amino acids)=425AA_BP=309
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEEL
LRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTS

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>21162_21162_4_CYTH3-MAD1L1_CYTH3_chr7_6210165_ENST00000350796_MAD1L1_chr7_1938026_ENST00000406869_length(amino acids)=425AA_BP=309
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEEL
LRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTS

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>21162_21162_5_CYTH3-MAD1L1_CYTH3_chr7_6210165_ENST00000396741_MAD1L1_chr7_1938026_ENST00000265854_length(amino acids)=307AA_BP=191
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFF
NPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLLETE

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>21162_21162_6_CYTH3-MAD1L1_CYTH3_chr7_6210165_ENST00000396741_MAD1L1_chr7_1938026_ENST00000399654_length(amino acids)=307AA_BP=191
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFF
NPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLLETE

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>21162_21162_7_CYTH3-MAD1L1_CYTH3_chr7_6210165_ENST00000396741_MAD1L1_chr7_1938026_ENST00000402746_length(amino acids)=307AA_BP=191
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFF
NPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLLETE

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>21162_21162_8_CYTH3-MAD1L1_CYTH3_chr7_6210165_ENST00000396741_MAD1L1_chr7_1938026_ENST00000406869_length(amino acids)=307AA_BP=191
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFF
NPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLLETE

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>21162_21162_9_CYTH3-MAD1L1_CYTH3_chr7_6210166_ENST00000350796_MAD1L1_chr7_1938026_ENST00000265854_length(amino acids)=425AA_BP=309
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEEL
LRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTS

--------------------------------------------------------------

>21162_21162_10_CYTH3-MAD1L1_CYTH3_chr7_6210166_ENST00000350796_MAD1L1_chr7_1938026_ENST00000399654_length(amino acids)=425AA_BP=309
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEEL
LRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTS

--------------------------------------------------------------

>21162_21162_11_CYTH3-MAD1L1_CYTH3_chr7_6210166_ENST00000350796_MAD1L1_chr7_1938026_ENST00000402746_length(amino acids)=425AA_BP=309
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEEL
LRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTS

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>21162_21162_12_CYTH3-MAD1L1_CYTH3_chr7_6210166_ENST00000350796_MAD1L1_chr7_1938026_ENST00000406869_length(amino acids)=425AA_BP=309
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEEL
LRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTS

--------------------------------------------------------------

>21162_21162_13_CYTH3-MAD1L1_CYTH3_chr7_6210166_ENST00000396741_MAD1L1_chr7_1938026_ENST00000265854_length(amino acids)=307AA_BP=191
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFF
NPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLLETE

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>21162_21162_14_CYTH3-MAD1L1_CYTH3_chr7_6210166_ENST00000396741_MAD1L1_chr7_1938026_ENST00000399654_length(amino acids)=307AA_BP=191
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFF
NPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLLETE

--------------------------------------------------------------

>21162_21162_15_CYTH3-MAD1L1_CYTH3_chr7_6210166_ENST00000396741_MAD1L1_chr7_1938026_ENST00000402746_length(amino acids)=307AA_BP=191
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFF
NPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLLETE

--------------------------------------------------------------

>21162_21162_16_CYTH3-MAD1L1_CYTH3_chr7_6210166_ENST00000396741_MAD1L1_chr7_1938026_ENST00000406869_length(amino acids)=307AA_BP=191
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFF
NPDREGWLLKLELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLLETE

--------------------------------------------------------------

>21162_21162_17_CYTH3-MAD1L1_CYTH3_chr7_6210833_ENST00000350796_MAD1L1_chr7_1938026_ENST00000265854_length(amino acids)=338AA_BP=222
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYR

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>21162_21162_18_CYTH3-MAD1L1_CYTH3_chr7_6210833_ENST00000350796_MAD1L1_chr7_1938026_ENST00000399654_length(amino acids)=338AA_BP=222
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYR

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>21162_21162_19_CYTH3-MAD1L1_CYTH3_chr7_6210833_ENST00000350796_MAD1L1_chr7_1938026_ENST00000402746_length(amino acids)=338AA_BP=222
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYR

--------------------------------------------------------------

>21162_21162_20_CYTH3-MAD1L1_CYTH3_chr7_6210833_ENST00000350796_MAD1L1_chr7_1938026_ENST00000406869_length(amino acids)=338AA_BP=222
MRSRPVACALPPAASPARGPSAAGPRLAGCGSGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKYEIAEVMTEIDNL
TSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNL
VQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYR

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>21162_21162_21_CYTH3-MAD1L1_CYTH3_chr7_6210833_ENST00000396741_MAD1L1_chr7_1938026_ENST00000265854_length(amino acids)=220AA_BP=104
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLL

--------------------------------------------------------------

>21162_21162_22_CYTH3-MAD1L1_CYTH3_chr7_6210833_ENST00000396741_MAD1L1_chr7_1938026_ENST00000399654_length(amino acids)=220AA_BP=104
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLL

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>21162_21162_23_CYTH3-MAD1L1_CYTH3_chr7_6210833_ENST00000396741_MAD1L1_chr7_1938026_ENST00000402746_length(amino acids)=220AA_BP=104
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLL

--------------------------------------------------------------

>21162_21162_24_CYTH3-MAD1L1_CYTH3_chr7_6210833_ENST00000396741_MAD1L1_chr7_1938026_ENST00000406869_length(amino acids)=220AA_BP=104
MLMALPQLQTAMLAAFLWDPRDVVLTAQPGAEQCAESSQHIRILQPQFRLIRLRFWKLYIQRRVQAWQFLWSFRLPGEAQKIDRMMEAFA
SRYCLCNPGVFQSTELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKATSPSGSKMQLL

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