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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>22209_22209_1_DENND1B-ATP6V1G3_DENND1B_chr1_197684160_ENST00000367396_ATP6V1G3_chr1_198498311_ENST00000309309_length(amino acids)=111AA_BP=
MLPPWLASIAFLFLVSKVLWEFPQYHRIFIFRGMTFHFQHQVKGSVWICLGPAVHGYMSVWGCPSGPRALAWKPAARPREGRAVPAHAGG

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>22209_22209_2_DENND1B-ATP6V1G3_DENND1B_chr1_197684160_ENST00000400967_ATP6V1G3_chr1_198498311_ENST00000309309_length(amino acids)=113AA_BP=22
MAPTCIFESCGIVEIPRGLWRPGKGKRLKQAKEEAMVEIDQYRMQRDKEFRLKQSKIMGSQNNLSDEIEEQTLGKIQELNGHYNKYMESV

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>22209_22209_3_DENND1B-ATP6V1G3_DENND1B_chr1_197684161_ENST00000367396_ATP6V1G3_chr1_198498311_ENST00000309309_length(amino acids)=111AA_BP=
MLPPWLASIAFLFLVSKVLWEFPQYHRIFIFRGMTFHFQHQVKGSVWICLGPAVHGYMSVWGCPSGPRALAWKPAARPREGRAVPAHAGG

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>22209_22209_4_DENND1B-ATP6V1G3_DENND1B_chr1_197684161_ENST00000400967_ATP6V1G3_chr1_198498311_ENST00000309309_length(amino acids)=113AA_BP=22
MAPTCIFESCGIVEIPRGLWRPGKGKRLKQAKEEAMVEIDQYRMQRDKEFRLKQSKIMGSQNNLSDEIEEQTLGKIQELNGHYNKYMESV

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