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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>23711_23711_1_DNMT3A-KIF3C_DNMT3A_chr2_25536781_ENST00000321117_KIF3C_chr2_26152932_ENST00000264712_length(amino acids)=134AA_BP=9
MLRSGRRTESSSSQMKKRPTSAVGYKRPISQYARVAMAMGSHPRYRAENIMFLELDVSPPAVFEMEFSHDQEQDPRALHMERLMRLDSFL

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>23711_23711_2_DNMT3A-KIF3C_DNMT3A_chr2_25536781_ENST00000321117_KIF3C_chr2_26152932_ENST00000405914_length(amino acids)=134AA_BP=9
MLRSGRRTESSSSQMKKRPTSAVGYKRPISQYARVAMAMGSHPRYRAENIMFLELDVSPPAVFEMEFSHDQEQDPRALHMERLMRLDSFL

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