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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>23809_23809_1_DOCK5-FNTA_DOCK5_chr8_25101273_ENST00000276440_FNTA_chr8_42919244_ENST00000302279_length(amino acids)=326AA_BP=42
MARWIPTKRQKYGVAIYNYNASQDVELSLQIGDTVHILEMYEVRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKS
LQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN
NSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDML

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>23809_23809_2_DOCK5-FNTA_DOCK5_chr8_25101273_ENST00000410074_FNTA_chr8_42919244_ENST00000302279_length(amino acids)=326AA_BP=42
MARWIPTKRQKYGVAIYNYNASQDVELSLQIGDTVHILEMYEVRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKS
LQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN
NSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDML

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>23809_23809_3_DOCK5-FNTA_DOCK5_chr8_25101273_ENST00000481100_FNTA_chr8_42919244_ENST00000302279_length(amino acids)=326AA_BP=42
MARWIPTKRQKYGVAIYNYNASQDVELSLQIGDTVHILEMYEVRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKS
LQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN
NSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDML

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