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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>24866_24866_1_ECE2-HTR3D_ECE2_chr3_183967678_ENST00000324557_HTR3D_chr3_183756196_ENST00000334128_length(amino acids)=213AA_BP=65
MASPGAGRAPPELPERNCGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGVYFALCLSLMVGSLLETIFITHLL
HVATTQPLPLPRWLHSLLLHCTGQGRCCPTAPQKGNKGPGLTPTHLPGVKEPEVSAGQMPGPGEAELTGGSEWTRAQREHEAQKQHSVEL

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>24866_24866_2_ECE2-HTR3D_ECE2_chr3_183967678_ENST00000324557_HTR3D_chr3_183756196_ENST00000428798_length(amino acids)=213AA_BP=65
MASPGAGRAPPELPERNCGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGVYFALCLSLMVGSLLETIFITHLL
HVATTQPLPLPRWLHSLLLHCTGQGRCCPTAPQKGNKGPGLTPTHLPGVKEPEVSAGQMPGPGEAELTGGSEWTRAQREHEAQKQHSVEL

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>24866_24866_3_ECE2-HTR3D_ECE2_chr3_183967678_ENST00000324557_HTR3D_chr3_183756196_ENST00000453435_length(amino acids)=213AA_BP=65
MASPGAGRAPPELPERNCGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGVYFALCLSLMVGSLLETIFITHLL
HVATTQPLPLPRWLHSLLLHCTGQGRCCPTAPQKGNKGPGLTPTHLPGVKEPEVSAGQMPGPGEAELTGGSEWTRAQREHEAQKQHSVEL

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>24866_24866_4_ECE2-HTR3D_ECE2_chr3_183967678_ENST00000402825_HTR3D_chr3_183756196_ENST00000334128_length(amino acids)=213AA_BP=65
MASPGAGRAPPELPERNCGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGVYFALCLSLMVGSLLETIFITHLL
HVATTQPLPLPRWLHSLLLHCTGQGRCCPTAPQKGNKGPGLTPTHLPGVKEPEVSAGQMPGPGEAELTGGSEWTRAQREHEAQKQHSVEL

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>24866_24866_5_ECE2-HTR3D_ECE2_chr3_183967678_ENST00000402825_HTR3D_chr3_183756196_ENST00000428798_length(amino acids)=213AA_BP=65
MASPGAGRAPPELPERNCGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGVYFALCLSLMVGSLLETIFITHLL
HVATTQPLPLPRWLHSLLLHCTGQGRCCPTAPQKGNKGPGLTPTHLPGVKEPEVSAGQMPGPGEAELTGGSEWTRAQREHEAQKQHSVEL

--------------------------------------------------------------

>24866_24866_6_ECE2-HTR3D_ECE2_chr3_183967678_ENST00000402825_HTR3D_chr3_183756196_ENST00000453435_length(amino acids)=213AA_BP=65
MASPGAGRAPPELPERNCGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGVYFALCLSLMVGSLLETIFITHLL
HVATTQPLPLPRWLHSLLLHCTGQGRCCPTAPQKGNKGPGLTPTHLPGVKEPEVSAGQMPGPGEAELTGGSEWTRAQREHEAQKQHSVEL

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