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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>25498_25498_1_EGLN2-RPL13_EGLN2_chr19_41307320_ENST00000303961_RPL13_chr16_89629291_ENST00000393099_length(amino acids)=382AA_BP=330
MLSALPHPAPRQARWPPAASSGGGGGGGGGWHHGPGRCPPCPGDEDTAAMDSPCQPQPLSQALPQLPGSSSEPLEPEPGRARMGVESYLP
CPLLPSYHCPGVPSEASAGSGTPRATATSTTASPLRDGFGGQDGGELRPLQSEGAAALVTKGCQRLAAQGARPEAPKRKWAEDGGDAPSP
SKRPWARQENQEAEREGGMSCSCSSGSGEASAGLMEEALPSAPERLALDYIVPCMRYYGICVKDSFLGAALGGRVLAEVEALKRGGRLRD
GQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYVINGRTKVYKKEKARVITEEEKNFKAFASLRMARANA

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>25498_25498_2_EGLN2-RPL13_EGLN2_chr19_41307320_ENST00000406058_RPL13_chr16_89629291_ENST00000393099_length(amino acids)=382AA_BP=330
MLSALPHPAPRQARWPPAASSGGGGGGGGGWHHGPGRCPPCPGDEDTAAMDSPCQPQPLSQALPQLPGSSSEPLEPEPGRARMGVESYLP
CPLLPSYHCPGVPSEASAGSGTPRATATSTTASPLRDGFGGQDGGELRPLQSEGAAALVTKGCQRLAAQGARPEAPKRKWAEDGGDAPSP
SKRPWARQENQEAEREGGMSCSCSSGSGEASAGLMEEALPSAPERLALDYIVPCMRYYGICVKDSFLGAALGGRVLAEVEALKRGGRLRD
GQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYVINGRTKVYKKEKARVITEEEKNFKAFASLRMARANA

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>25498_25498_3_EGLN2-RPL13_EGLN2_chr19_41307320_ENST00000593726_RPL13_chr16_89629291_ENST00000393099_length(amino acids)=382AA_BP=330
MLSALPHPAPRQARWPPAASSGGGGGGGGGWHHGPGRCPPCPGDEDTAAMDSPCQPQPLSQALPQLPGSSSEPLEPEPGRARMGVESYLP
CPLLPSYHCPGVPSEASAGSGTPRATATSTTASPLRDGFGGQDGGELRPLQSEGAAALVTKGCQRLAAQGARPEAPKRKWAEDGGDAPSP
SKRPWARQENQEAEREGGMSCSCSSGSGEASAGLMEEALPSAPERLALDYIVPCMRYYGICVKDSFLGAALGGRVLAEVEALKRGGRLRD
GQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYVINGRTKVYKKEKARVITEEEKNFKAFASLRMARANA

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