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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>25591_25591_1_EHMT1-TMCO3_EHMT1_chr9_140513501_ENST00000460843_TMCO3_chr13_114164552_ENST00000375391_length(amino acids)=83AA_BP=

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>25591_25591_2_EHMT1-TMCO3_EHMT1_chr9_140513501_ENST00000460843_TMCO3_chr13_114164552_ENST00000434316_length(amino acids)=343AA_BP=12
MRARAMAAADAEVWKISLQGPCYMTLLMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGMLVTQ
DVQLGLFMAVMPTLIQAGASASSSIVVEVLRILVLIGQILFSLAAVFLLCLVIKKYLIGPYYRKLHMESKGNKEILILGISAFIFLMLTV
TELLDVSMELGCFLAGALVSSQGPVVTEEIATSIEPIRDFLAIVFFASIGLHVFPTFVAYELTVLVFLTLSVVVMKFLLAALVLSLILPR

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>25591_25591_3_EHMT1-TMCO3_EHMT1_chr9_140513501_ENST00000462484_TMCO3_chr13_114164552_ENST00000375391_length(amino acids)=83AA_BP=

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>25591_25591_4_EHMT1-TMCO3_EHMT1_chr9_140513501_ENST00000462484_TMCO3_chr13_114164552_ENST00000434316_length(amino acids)=343AA_BP=12
MRARAMAAADAEVWKISLQGPCYMTLLMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGMLVTQ
DVQLGLFMAVMPTLIQAGASASSSIVVEVLRILVLIGQILFSLAAVFLLCLVIKKYLIGPYYRKLHMESKGNKEILILGISAFIFLMLTV
TELLDVSMELGCFLAGALVSSQGPVVTEEIATSIEPIRDFLAIVFFASIGLHVFPTFVAYELTVLVFLTLSVVVMKFLLAALVLSLILPR

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