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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>25888_25888_1_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000248342_PPP2R2A_chr8_26223831_ENST00000315985_length(amino acids)=281AA_BP=158
MERQQRRRFRFHHLFLFPSLRTPCRVSVSLQPWLWKATEVMAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAV
LKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWVHEYLRSKLCSLYENDCIFDKF
ECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATT

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>25888_25888_2_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000248342_PPP2R2A_chr8_26223831_ENST00000380737_length(amino acids)=281AA_BP=158
MERQQRRRFRFHHLFLFPSLRTPCRVSVSLQPWLWKATEVMAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAV
LKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWVHEYLRSKLCSLYENDCIFDKF
ECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATT

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>25888_25888_3_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000538434_PPP2R2A_chr8_26223831_ENST00000315985_length(amino acids)=172AA_BP=49
MLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNF

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>25888_25888_4_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000538434_PPP2R2A_chr8_26223831_ENST00000380737_length(amino acids)=172AA_BP=49
MLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNF

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>25888_25888_5_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000545173_PPP2R2A_chr8_26223831_ENST00000315985_length(amino acids)=266AA_BP=143
LFPSLRTPCRVSVSLQPWLWKATEVMAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTV
TAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS

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>25888_25888_6_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000545173_PPP2R2A_chr8_26223831_ENST00000380737_length(amino acids)=266AA_BP=143
LFPSLRTPCRVSVSLQPWLWKATEVMAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTV
TAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS

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>25888_25888_7_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000588934_PPP2R2A_chr8_26223831_ENST00000315985_length(amino acids)=266AA_BP=143
MFPSLRTPCRVSVSLQPWLWKATEVMAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTV
TAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS

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>25888_25888_8_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000588934_PPP2R2A_chr8_26223831_ENST00000380737_length(amino acids)=266AA_BP=143
MFPSLRTPCRVSVSLQPWLWKATEVMAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTV
TAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS

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>25888_25888_9_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000592558_PPP2R2A_chr8_26223831_ENST00000315985_length(amino acids)=248AA_BP=125
MWKATEVMAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFT
LCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITL

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>25888_25888_10_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000592558_PPP2R2A_chr8_26223831_ENST00000380737_length(amino acids)=248AA_BP=125
MWKATEVMAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFT
LCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITL

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>25888_25888_11_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000593149_PPP2R2A_chr8_26223831_ENST00000315985_length(amino acids)=216AA_BP=93
MATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQ
AFWVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVD

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>25888_25888_12_EIF3K-PPP2R2A_EIF3K_chr19_39116742_ENST00000593149_PPP2R2A_chr8_26223831_ENST00000380737_length(amino acids)=216AA_BP=93
MATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQ
AFWVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVD

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