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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>27644_27644_1_ETHE1-BMP5_ETHE1_chr19_44030667_ENST00000292147_BMP5_chr6_55639041_ENST00000370830_length(amino acids)=252AA_BP=75
MAEAVLRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAGRSINVKSAGLVGRQ
GPQSKQPFMVAFFKASEVLLRSVRAANKRKNQNRNKSSSHQDSSRMSSVGDYNTSEQKQACKKHELYVSFRDLGWQDWIIAPEGYAAFYC

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>27644_27644_2_ETHE1-BMP5_ETHE1_chr19_44030667_ENST00000292147_BMP5_chr6_55639041_ENST00000446683_length(amino acids)=215AA_BP=75
MAEAVLRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAGRSINVKSAGLVGRQ
GPQSKQPFMVAFFKASEVLLRSVRAANKRKNQNRNKSSSHQDSSRMSSVGDYNTSEQKQACKKHELYVSFRDLGWQVHLMFPDHVPKPCC

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>27644_27644_3_ETHE1-BMP5_ETHE1_chr19_44030667_ENST00000600651_BMP5_chr6_55639041_ENST00000370830_length(amino acids)=252AA_BP=75
MAEAVLRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAGRSINVKSAGLVGRQ
GPQSKQPFMVAFFKASEVLLRSVRAANKRKNQNRNKSSSHQDSSRMSSVGDYNTSEQKQACKKHELYVSFRDLGWQDWIIAPEGYAAFYC

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>27644_27644_4_ETHE1-BMP5_ETHE1_chr19_44030667_ENST00000600651_BMP5_chr6_55639041_ENST00000446683_length(amino acids)=215AA_BP=75
MAEAVLRVARRQLSQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAGRSINVKSAGLVGRQ
GPQSKQPFMVAFFKASEVLLRSVRAANKRKNQNRNKSSSHQDSSRMSSVGDYNTSEQKQACKKHELYVSFRDLGWQVHLMFPDHVPKPCC

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