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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>2772_2772_1_AGAP1-IFIH1_AGAP1_chr2_236403493_ENST00000304032_IFIH1_chr2_163167443_ENST00000421365_length(amino acids)=186AA_BP=
MFSAAAIFDGDDVLPDLVLQHRLLHALQQLVDGVDVGVDRLEALDLGPDGSRVGQLLLVVHGAGAAPGAARPPPPPPRAPGPAGRRARGA
AAPGEPGPPAAGGGGARRKARAEQARGWPAGSVHGRDARPASERAPASRVSGPPGGSAPPWSAPRRVRPAPKEACSGDFLSRSRLPALGA

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>2772_2772_2_AGAP1-IFIH1_AGAP1_chr2_236403493_ENST00000336665_IFIH1_chr2_163167443_ENST00000421365_length(amino acids)=186AA_BP=
MFSAAAIFDGDDVLPDLVLQHRLLHALQQLVDGVDVGVDRLEALDLGPDGSRVGQLLLVVHGAGAAPGAARPPPPPPRAPGPAGRRARGA
AAPGEPGPPAAGGGGARRKARAEQARGWPAGSVHGRDARPASERAPASRVSGPPGGSAPPWSAPRRVRPAPKEACSGDFLSRSRLPALGA

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>2772_2772_3_AGAP1-IFIH1_AGAP1_chr2_236403493_ENST00000409457_IFIH1_chr2_163167443_ENST00000421365_length(amino acids)=186AA_BP=
MFSAAAIFDGDDVLPDLVLQHRLLHALQQLVDGVDVGVDRLEALDLGPDGSRVGQLLLVVHGAGAAPGAARPPPPPPRAPGPAGRRARGA
AAPGEPGPPAAGGGGARRKARAEQARGWPAGSVHGRDARPASERAPASRVSGPPGGSAPPWSAPRRVRPAPKEACSGDFLSRSRLPALGA

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