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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>27747_27747_1_ETV6-RP2_ETV6_chr12_11905513_ENST00000396373_RP2_chrX_46736940_ENST00000218340_length(amino acids)=110AA_BP=55
MSETPAQCSIKQERISYTPPESPVPSYASSTPLHVPVPRALRMEEDSIRLPAHLRPVIALEFNGDGAVEVCQLIVNEIFNGTKMFVSESK

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