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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>27981_27981_1_EXOSC4-NEIL2_EXOSC4_chr8_145133800_ENST00000316052_NEIL2_chr8_11637105_ENST00000436750_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_2_EXOSC4-NEIL2_EXOSC4_chr8_145133800_ENST00000316052_NEIL2_chr8_11637105_ENST00000455213_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_3_EXOSC4-NEIL2_EXOSC4_chr8_145133800_ENST00000525936_NEIL2_chr8_11637105_ENST00000436750_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_4_EXOSC4-NEIL2_EXOSC4_chr8_145133800_ENST00000525936_NEIL2_chr8_11637105_ENST00000455213_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_5_EXOSC4-NEIL2_EXOSC4_chr8_145133802_ENST00000316052_NEIL2_chr8_11637106_ENST00000436750_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_6_EXOSC4-NEIL2_EXOSC4_chr8_145133802_ENST00000316052_NEIL2_chr8_11637106_ENST00000455213_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_7_EXOSC4-NEIL2_EXOSC4_chr8_145133802_ENST00000316052_NEIL2_chr8_11637107_ENST00000436750_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_8_EXOSC4-NEIL2_EXOSC4_chr8_145133802_ENST00000316052_NEIL2_chr8_11637107_ENST00000455213_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_9_EXOSC4-NEIL2_EXOSC4_chr8_145133802_ENST00000525936_NEIL2_chr8_11637106_ENST00000436750_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_10_EXOSC4-NEIL2_EXOSC4_chr8_145133802_ENST00000525936_NEIL2_chr8_11637106_ENST00000455213_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_11_EXOSC4-NEIL2_EXOSC4_chr8_145133802_ENST00000525936_NEIL2_chr8_11637107_ENST00000436750_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_12_EXOSC4-NEIL2_EXOSC4_chr8_145133802_ENST00000525936_NEIL2_chr8_11637107_ENST00000455213_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_13_EXOSC4-NEIL2_EXOSC4_chr8_145133803_ENST00000316052_NEIL2_chr8_11637108_ENST00000436750_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_14_EXOSC4-NEIL2_EXOSC4_chr8_145133803_ENST00000316052_NEIL2_chr8_11637108_ENST00000455213_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_15_EXOSC4-NEIL2_EXOSC4_chr8_145133803_ENST00000525936_NEIL2_chr8_11637108_ENST00000436750_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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>27981_27981_16_EXOSC4-NEIL2_EXOSC4_chr8_145133803_ENST00000525936_NEIL2_chr8_11637108_ENST00000455213_length(amino acids)=343AA_BP=57
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQ
KEGAADPKQVGEPSGQKTLDGSSRSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRDPSPRLVLHF
GGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV

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