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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>2856_2856_1_AGBL5-CHD5_AGBL5_chr2_27276821_ENST00000323064_CHD5_chr1_6214829_ENST00000262450_length(amino acids)=400AA_BP=
MIWPPARLEPPSTRQGRFGEPLSSPMVRPWLTFPLLPAKAGGRQVFALSLWGGGSSASRCLSPAQRILKALDSVTSGGPVAPALHSRQKR
MIPGRVGWGGGSTCLGATAALGLPSARGVVKGSDSCAPARRVMGPELAQETLALPCALGCLPCPPPEVEPGCPWGPGLVPFPCPWKGLPG
GFLPEAALLEGVGRVLPGGGLDPVPSADPSQPQHQGLAALFPARSALTSQNHLPTCGLLESHPLPRTLPLQVGDGDGEQVRPSLGLFVCD
PSPGPRSTWKAFLSLVLGPSQGRCLGVQNPGNVRKGLREKPSWAWGGGAHGLGLSSLERACLGLRGPGLGQDSPACVADTGAIAWPSLSP

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>2856_2856_2_AGBL5-CHD5_AGBL5_chr2_27276821_ENST00000360131_CHD5_chr1_6214829_ENST00000262450_length(amino acids)=400AA_BP=
MIWPPARLEPPSTRQGRFGEPLSSPMVRPWLTFPLLPAKAGGRQVFALSLWGGGSSASRCLSPAQRILKALDSVTSGGPVAPALHSRQKR
MIPGRVGWGGGSTCLGATAALGLPSARGVVKGSDSCAPARRVMGPELAQETLALPCALGCLPCPPPEVEPGCPWGPGLVPFPCPWKGLPG
GFLPEAALLEGVGRVLPGGGLDPVPSADPSQPQHQGLAALFPARSALTSQNHLPTCGLLESHPLPRTLPLQVGDGDGEQVRPSLGLFVCD
PSPGPRSTWKAFLSLVLGPSQGRCLGVQNPGNVRKGLREKPSWAWGGGAHGLGLSSLERACLGLRGPGLGQDSPACVADTGAIAWPSLSP

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