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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>28934_28934_1_FAM219A-PAX5_FAM219A_chr9_34458202_ENST00000297620_PAX5_chr9_36923481_ENST00000358127_length(amino acids)=232AA_BP=
MTGIGAHRLVPSGSSLAHGHFSLGRQKILQVFILECHSGGQAHFWASRALLHRTVWCAARVARLHHPVHPGSSSFRGLEIVICVSRGCGH
PGGPGLGTPAYCHSQAWSLFQSAKAKKGKWGTAHDLGTWTPGVRAGPMSRPGQGLWHGLELTLIPSEPQGQLGKSLDETSEALLWIWSKT

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>28934_28934_2_FAM219A-PAX5_FAM219A_chr9_34458202_ENST00000379078_PAX5_chr9_36923481_ENST00000358127_length(amino acids)=232AA_BP=
MTGIGAHRLVPSGSSLAHGHFSLGRQKILQVFILECHSGGQAHFWASRALLHRTVWCAARVARLHHPVHPGSSSFRGLEIVICVSRGCGH
PGGPGLGTPAYCHSQAWSLFQSAKAKKGKWGTAHDLGTWTPGVRAGPMSRPGQGLWHGLELTLIPSEPQGQLGKSLDETSEALLWIWSKT

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>28934_28934_3_FAM219A-PAX5_FAM219A_chr9_34458202_ENST00000379084_PAX5_chr9_36923481_ENST00000358127_length(amino acids)=232AA_BP=
MTGIGAHRLVPSGSSLAHGHFSLGRQKILQVFILECHSGGQAHFWASRALLHRTVWCAARVARLHHPVHPGSSSFRGLEIVICVSRGCGH
PGGPGLGTPAYCHSQAWSLFQSAKAKKGKWGTAHDLGTWTPGVRAGPMSRPGQGLWHGLELTLIPSEPQGQLGKSLDETSEALLWIWSKT

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>28934_28934_4_FAM219A-PAX5_FAM219A_chr9_34458202_ENST00000379087_PAX5_chr9_36923481_ENST00000358127_length(amino acids)=232AA_BP=
MTGIGAHRLVPSGSSLAHGHFSLGRQKILQVFILECHSGGQAHFWASRALLHRTVWCAARVARLHHPVHPGSSSFRGLEIVICVSRGCGH
PGGPGLGTPAYCHSQAWSLFQSAKAKKGKWGTAHDLGTWTPGVRAGPMSRPGQGLWHGLELTLIPSEPQGQLGKSLDETSEALLWIWSKT

--------------------------------------------------------------

>28934_28934_5_FAM219A-PAX5_FAM219A_chr9_34458202_ENST00000379089_PAX5_chr9_36923481_ENST00000358127_length(amino acids)=232AA_BP=
MTGIGAHRLVPSGSSLAHGHFSLGRQKILQVFILECHSGGQAHFWASRALLHRTVWCAARVARLHHPVHPGSSSFRGLEIVICVSRGCGH
PGGPGLGTPAYCHSQAWSLFQSAKAKKGKWGTAHDLGTWTPGVRAGPMSRPGQGLWHGLELTLIPSEPQGQLGKSLDETSEALLWIWSKT

--------------------------------------------------------------

>28934_28934_6_FAM219A-PAX5_FAM219A_chr9_34458202_ENST00000445726_PAX5_chr9_36923481_ENST00000358127_length(amino acids)=232AA_BP=
MTGIGAHRLVPSGSSLAHGHFSLGRQKILQVFILECHSGGQAHFWASRALLHRTVWCAARVARLHHPVHPGSSSFRGLEIVICVSRGCGH
PGGPGLGTPAYCHSQAWSLFQSAKAKKGKWGTAHDLGTWTPGVRAGPMSRPGQGLWHGLELTLIPSEPQGQLGKSLDETSEALLWIWSKT

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