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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>2972_2972_1_AGPAT6-FNTA_AGPAT6_chr8_41472567_ENST00000396987_FNTA_chr8_42940302_ENST00000342116_length(amino acids)=434AA_BP=394
MEWGLLFFGNLLPFPGWCCQEGPSEGCNLFLGRQVLAWPGSSTMFLLLPFDSLIVNLLGISLTVLFTLLLVFIIVPAIFGVSFGIRKLYM
KSLLKIFAWATLRMERGAKEKNHQLYKPYTNGIIAKDPTSLEEEIKEIRRSGSSKALDNTPEFELSDIFYFCRKGMETIMDDEVTKRFSA
EELESWNLLSRTNYNFQYISLRLTVLWGLGVLIRYCFLLPLRIALAFTGISLLVVGTTVVGYLPNGRFKEFMSKHVHLMCYRICVRALTA
IITYHDRENRPRNGGICVANHTSPIDVIILASDGYYAMVGQVHGGLMGVIQRAMVKACPHVWFERSEVKDRHLVAKRLTEHVQDKSKLPI

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>2972_2972_2_AGPAT6-FNTA_AGPAT6_chr8_41472567_ENST00000396987_FNTA_chr8_42940303_ENST00000342116_length(amino acids)=434AA_BP=394
MEWGLLFFGNLLPFPGWCCQEGPSEGCNLFLGRQVLAWPGSSTMFLLLPFDSLIVNLLGISLTVLFTLLLVFIIVPAIFGVSFGIRKLYM
KSLLKIFAWATLRMERGAKEKNHQLYKPYTNGIIAKDPTSLEEEIKEIRRSGSSKALDNTPEFELSDIFYFCRKGMETIMDDEVTKRFSA
EELESWNLLSRTNYNFQYISLRLTVLWGLGVLIRYCFLLPLRIALAFTGISLLVVGTTVVGYLPNGRFKEFMSKHVHLMCYRICVRALTA
IITYHDRENRPRNGGICVANHTSPIDVIILASDGYYAMVGQVHGGLMGVIQRAMVKACPHVWFERSEVKDRHLVAKRLTEHVQDKSKLPI

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