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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>3006_3006_1_AGRN-RPL12_AGRN_chr1_957842_ENST00000379370_RPL12_chr9_130210702_ENST00000361436_length(amino acids)=222AA_BP=154
MAGRSHPGPLRPLLPLLVVAACVLPGAGGTCPERALERREEEANVVLTGTVEEILNVDPVQHTYSCKVRVWRYLKGKDLVARESLLDGGN
KVVISGFGDPLICDNQVSTGDTRIFFVNPAPPYLWPAHKNELMLNSSLMRITLRNLEEVEFCVEVKHSGNITFDEIVNIARQMRHRSLAR

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>3006_3006_2_AGRN-RPL12_AGRN_chr1_957842_ENST00000379370_RPL12_chr9_130210702_ENST00000536368_length(amino acids)=222AA_BP=154
MAGRSHPGPLRPLLPLLVVAACVLPGAGGTCPERALERREEEANVVLTGTVEEILNVDPVQHTYSCKVRVWRYLKGKDLVARESLLDGGN
KVVISGFGDPLICDNQVSTGDTRIFFVNPAPPYLWPAHKNELMLNSSLMRITLRNLEEVEFCVEVKHSGNITFDEIVNIARQMRHRSLAR

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