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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>31821_31821_1_FUS-RPS12_FUS_chr16_31196463_ENST00000254108_RPS12_chr6_133136157_ENST00000230050_length(amino acids)=309AA_BP=197
MLACLCARARTWPQTIIPNKQPKAMGPTPPSPGRAIPSRAVSPTDSRVTVVIASPRTLQAMARAAILLMARARTQAMELSQLPRDMARLA
AMAVARAPNRLTGSSPPTLAMASSQLPAAPREVTVAVLRAAAMGSPRVGATASSLAMVDSSKAMDSSKAIIPLRAMDSRTSTTAAVVVEV
EVEVEVVEVAVEAEVAWVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCK

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>31821_31821_2_FUS-RPS12_FUS_chr16_31196463_ENST00000380244_RPS12_chr6_133136157_ENST00000230050_length(amino acids)=308AA_BP=196
MLACLCARARTWPQTIIPNKQPKAMGPTPPSPGRAIPSRAVSPTDSRVTVVIASPRTLQAMARAAILLMARARTAMELSQLPRDMARLAA
MAVARAPNRLTGSSPPTLAMASSQLPAAPREVTVAVLRAAAMGSPRVGATASSLAMVDSSKAMDSSKAIIPLRAMDSRTSTTAAVVVEVE
VEVEVVEVAVEAEVAWVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKI

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>31821_31821_3_FUS-RPS12_FUS_chr16_31196463_ENST00000568685_RPS12_chr6_133136157_ENST00000230050_length(amino acids)=309AA_BP=197
MLACLCARARTWPQTIIPNKQPKAMGPTPPSPGRAIPSRAVSPTDSRVTVVIASPRTLQAMARAAILLMARARTQAMELSQLPRDMARLA
AMAVARAPNRLTGSSPPTLAMASSQLPAAPREVTVAVLRAAAMGSPRVGATASSLAMVDSSKAMDSSKAIIPLRAMDSRTSTTAAVVVEV
EVEVEVVEVAVEAEVAWVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCK

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