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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>32323_32323_1_GALNTL6-BARD1_GALNTL6_chr4_172735869_ENST00000506823_BARD1_chr2_215634036_ENST00000260947_length(amino acids)=511AA_BP=172
MDSADICSLLSTRFPGLPAAACRGACRQRARVRHFVDLHPNRSSARIPSPWIPVEPAGKLAPEGVELEFRWPTPSESCRLVLSTQQKFVA
SQFLVLRRGEERNLTLNTRSSQGAISFNFSSLLPFAMKRKQKRFLQMTLLFTVALIFLPNVGLWSLYKDKHLVKSAEPGEQQGDIPSVEY
LLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD
ESMKSLLLLPEKNESSSASHCSVMNTGQRRDGPLVLIGSGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILN
GCWILKFEWVKACLRRKVCEQEEKYEIPEGPRRSRLNREQLLPKLFDGCYFYLWGTFKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQT

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>32323_32323_2_GALNTL6-BARD1_GALNTL6_chr4_172735869_ENST00000506823_BARD1_chr2_215634036_ENST00000449967_length(amino acids)=445AA_BP=172
MDSADICSLLSTRFPGLPAAACRGACRQRARVRHFVDLHPNRSSARIPSPWIPVEPAGKLAPEGVELEFRWPTPSESCRLVLSTQQKFVA
SQFLVLRRGEERNLTLNTRSSQGAISFNFSSLLPFAMKRKQKRFLQMTLLFTVALIFLPNVGLWSLYKDKHLVKSAEPGEQQGDIPSVEY
LLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD
ESMKSLLLLPEKNESSSASHCSVMNTGQRRDGPLVLIGSGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILN

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>32323_32323_3_GALNTL6-BARD1_GALNTL6_chr4_172735869_ENST00000511251_BARD1_chr2_215634036_ENST00000260947_length(amino acids)=313AA_BP=
MHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSSA
SHCSVMNTGQRRDGPLVLIGSGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRKV
CEQEEKYEIPEGPRRSRLNREQLLPKLFDGCYFYLWGTFKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCT

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>32323_32323_4_GALNTL6-BARD1_GALNTL6_chr4_172735869_ENST00000511251_BARD1_chr2_215634036_ENST00000449967_length(amino acids)=247AA_BP=
MHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSSA
SHCSVMNTGQRRDGPLVLIGSGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRKV

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