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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>32554_32554_1_GAS7-CHMP4A_GAS7_chr17_9923094_ENST00000323816_CHMP4A_chr14_24681035_ENST00000347519_length(amino acids)=259AA_BP=47
MNARRAMKPGMVPPPPGEESQTVILPPGWQSYLSPQGRRYYVNTTTNGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKK
YGTKNKRAALQALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQIS

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>32554_32554_2_GAS7-CHMP4A_GAS7_chr17_9923094_ENST00000396115_CHMP4A_chr14_24681035_ENST00000347519_length(amino acids)=249AA_BP=37
MVPPPPGEESQTVILPPGWQSYLSPQGRRYYVNTTTNGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKRAAL
QALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISRPMGFG

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>32554_32554_3_GAS7-CHMP4A_GAS7_chr17_9923094_ENST00000432992_CHMP4A_chr14_24681035_ENST00000347519_length(amino acids)=340AA_BP=128
MGPRGAAAQPVGLGGNAGCAVNPGAKAMSGARCRTLYPFSGERHGQGLRFAAGELITLLQVPDGGWWEGEKEDGLRGWFPASYVQLLEKP
GMVPPPPGEESQTVILPPGWQSYLSPQGRRYYVNTTTNGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKRAA
LQALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISRPMGF

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>32554_32554_4_GAS7-CHMP4A_GAS7_chr17_9923094_ENST00000437099_CHMP4A_chr14_24681035_ENST00000347519_length(amino acids)=249AA_BP=37
MVPPPPGEESQTVILPPGWQSYLSPQGRRYYVNTTTNGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKRAAL
QALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISRPMGFG

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>32554_32554_5_GAS7-CHMP4A_GAS7_chr17_9923094_ENST00000585266_CHMP4A_chr14_24681035_ENST00000347519_length(amino acids)=254AA_BP=42
MMKPGMVPPPPGEESQTVILPPGWQSYLSPQGRRYYVNTTTNGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKN
KRAALQALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISR

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