|
|||||||
|
 Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >33535_33535_1_GNA13-ASPSCR1_GNA13_chr17_63049619_ENST00000439174_ASPSCR1_chr17_79966912_ENST00000306729_length(amino acids)=566AA_BP=230 MARPARPALRVSSLVPSLPGRARAAAALPALEPRCRSRPPPEEEVEGAGGARRGGGGGGKMADFLPSRSVLSVCFPGCLLTSGEAEQQRK SKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNSNQQHGD KMMSFDTRAPMAAQGMVETRVFLQYLPAIRALWADSGIQNAYDRRREFQLPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDD VRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTV LDDHTQTLFQPQLGDRVAPFTLGPSLKRCLGPEQRTRLPVVGDGGDVDSGRLLFWGPSRGRASPSTGQPPCHPVCRPSSPPSPRPSSGDP SRVKAGHKHVGTGRANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEP -------------------------------------------------------------- >33535_33535_2_GNA13-ASPSCR1_GNA13_chr17_63049619_ENST00000439174_ASPSCR1_chr17_79966912_ENST00000306739_length(amino acids)=472AA_BP=230 MARPARPALRVSSLVPSLPGRARAAAALPALEPRCRSRPPPEEEVEGAGGARRGGGGGGKMADFLPSRSVLSVCFPGCLLTSGEAEQQRK SKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNSNQQHGD KMMSFDTRAPMAAQGMVETRVFLQYLPAIRALWADSGIQNAYDRRREFQLPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDD VRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTV LDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGT -------------------------------------------------------------- >33535_33535_3_GNA13-ASPSCR1_GNA13_chr17_63049619_ENST00000439174_ASPSCR1_chr17_79966912_ENST00000580534_length(amino acids)=497AA_BP=230 MARPARPALRVSSLVPSLPGRARAAAALPALEPRCRSRPPPEEEVEGAGGARRGGGGGGKMADFLPSRSVLSVCFPGCLLTSGEAEQQRK SKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNSNQQHGD KMMSFDTRAPMAAQGMVETRVFLQYLPAIRALWADSGIQNAYDRRREFQLPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDD VRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLCLSSFGRM DGRGPRCFLTRRCLLSSVITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPA -------------------------------------------------------------- >33535_33535_4_GNA13-ASPSCR1_GNA13_chr17_63049620_ENST00000439174_ASPSCR1_chr17_79966913_ENST00000306729_length(amino acids)=566AA_BP=230 MARPARPALRVSSLVPSLPGRARAAAALPALEPRCRSRPPPEEEVEGAGGARRGGGGGGKMADFLPSRSVLSVCFPGCLLTSGEAEQQRK SKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNSNQQHGD KMMSFDTRAPMAAQGMVETRVFLQYLPAIRALWADSGIQNAYDRRREFQLPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDD VRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTV LDDHTQTLFQPQLGDRVAPFTLGPSLKRCLGPEQRTRLPVVGDGGDVDSGRLLFWGPSRGRASPSTGQPPCHPVCRPSSPPSPRPSSGDP SRVKAGHKHVGTGRANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEP -------------------------------------------------------------- >33535_33535_5_GNA13-ASPSCR1_GNA13_chr17_63049620_ENST00000439174_ASPSCR1_chr17_79966913_ENST00000306739_length(amino acids)=472AA_BP=230 MARPARPALRVSSLVPSLPGRARAAAALPALEPRCRSRPPPEEEVEGAGGARRGGGGGGKMADFLPSRSVLSVCFPGCLLTSGEAEQQRK SKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNSNQQHGD KMMSFDTRAPMAAQGMVETRVFLQYLPAIRALWADSGIQNAYDRRREFQLPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDD VRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTV LDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGT -------------------------------------------------------------- >33535_33535_6_GNA13-ASPSCR1_GNA13_chr17_63049620_ENST00000439174_ASPSCR1_chr17_79966913_ENST00000580534_length(amino acids)=497AA_BP=230 MARPARPALRVSSLVPSLPGRARAAAALPALEPRCRSRPPPEEEVEGAGGARRGGGGGGKMADFLPSRSVLSVCFPGCLLTSGEAEQQRK SKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNSNQQHGD KMMSFDTRAPMAAQGMVETRVFLQYLPAIRALWADSGIQNAYDRRREFQLPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDD VRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLCLSSFGRM DGRGPRCFLTRRCLLSSVITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPA -------------------------------------------------------------- >33535_33535_7_GNA13-ASPSCR1_GNA13_chr17_63049620_ENST00000439174_ASPSCR1_chr17_79966928_ENST00000306729_length(amino acids)=319AA_BP= MEERLQAWPAELPDEFFELTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRD FVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQPQLGDRVAPFTLGPSLKRCLGPEQRTRLPVVGDGGDVDSGRLLFWGPSRGRASPSTG QPPCHPVCRPSSPPSPRPSSGDPSRVKAGHKHVGTGRANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPL -------------------------------------------------------------- >33535_33535_8_GNA13-ASPSCR1_GNA13_chr17_63049620_ENST00000439174_ASPSCR1_chr17_79966928_ENST00000306739_length(amino acids)=260AA_BP=230 MARPARPALRVSSLVPSLPGRARAAAALPALEPRCRSRPPPEEEVEGAGGARRGGGGGGKMADFLPSRSVLSVCFPGCLLTSGEAEQQRK SKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNSNQQHGD -------------------------------------------------------------- >33535_33535_9_GNA13-ASPSCR1_GNA13_chr17_63049620_ENST00000439174_ASPSCR1_chr17_79966928_ENST00000580534_length(amino acids)=260AA_BP=230 MARPARPALRVSSLVPSLPGRARAAAALPALEPRCRSRPPPEEEVEGAGGARRGGGGGGKMADFLPSRSVLSVCFPGCLLTSGEAEQQRK SKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNSNQQHGD -------------------------------------------------------------- |
Copyright 2023-PresentThe University of Texas Health Science Center at Houston (UTHealth)
Web File Viewing | Emergency Information
Campus Carry|Site Policies