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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>33892_33892_1_GOLGA4-CTDSPL_GOLGA4_chr3_37315092_ENST00000356847_CTDSPL_chr3_38006062_ENST00000273179_length(amino acids)=263AA_BP=0
MFKKLKQKISEEQQQLQQALAPAQASSNSSTPTRMRSRTSSFTEQLDEGTPNRENASTHASKSPDSVNGSEPSIPQPPAKYLLPEVTVLD
YGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLF

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>33892_33892_2_GOLGA4-CTDSPL_GOLGA4_chr3_37315092_ENST00000356847_CTDSPL_chr3_38006062_ENST00000443503_length(amino acids)=263AA_BP=0
MFKKLKQKISEEQQQLQQALAPAQASSNSSTPTRMRSRTSSFTEQLDEGTPNRENASTHASKSPDSVNGSEPSIPQPPAKYLLPEVTVLD
YGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLF

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