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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>34406_34406_1_GPR157-TLE6_GPR157_chr1_9188704_ENST00000377411_TLE6_chr19_2980098_ENST00000246112_length(amino acids)=718AA_BP=162
MDASLGRLGAQTAAAWPHARPGFCPRGAPAPGPPRHAAVPAAHRAGAVGARRGAAVVRTLRARLGPAGGHARPVARPAQPGTAPAALPVA
GRPALGRLLLLRSAAELRGPVVGLRAAGRAVHLRQHQLLLLDRGHCALLVPQHRPRRARASHRSPALGLPCRQPCPGISNSESSPTLNYQ
GILNRLKQFPRFSPHFAAELESIYYSLHKIQQDVAEHHKQIGNVLQIVESCSQLQGFQSEEVSPAEPASPGTPQQVKDKTLQESSFEDIM
ATRSSDWLRRPLGEDNQPETQLFWDKEPWFWHDTLTEQLWRIFAGVHDEKAKPRDRQQAPGLGQESKAPGSCDPGTDPCPEDASTPRPPE
ASSSPPEGSQDRNTSWGVVQEPPGRASRFLQSISWDPEDFEDAWKRPDALPGQSKRLAVPCKLEKMRILAHGELVLATAISSFTRHVFTC
GRRGIKVWSLTGQVAEDRFPESHLPIQTPGAFLRTCLLSSNSRSLLTGGYNLASVSVWDLAAPSLHVKEQLPCAGLNCQALDANLDANLA
FASFTSGVVRIWDLRDQSVVRDLKGYPDGVKSIVVKGYNIWTGGPDACLRCWDQRTIMKPLEYQFKSQIMSLSHSPQEDWVLLGMANGQQ

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>34406_34406_2_GPR157-TLE6_GPR157_chr1_9188704_ENST00000414642_TLE6_chr19_2980098_ENST00000246112_length(amino acids)=605AA_BP=49
MRAAGRAVHLRQHQLLLLDRGHCALLVPQHRPRRARASHRSPALGLPCRQPCPGISNSESSPTLNYQGILNRLKQFPRFSPHFAAELESI
YYSLHKIQQDVAEHHKQIGNVLQIVESCSQLQGFQSEEVSPAEPASPGTPQQVKDKTLQESSFEDIMATRSSDWLRRPLGEDNQPETQLF
WDKEPWFWHDTLTEQLWRIFAGVHDEKAKPRDRQQAPGLGQESKAPGSCDPGTDPCPEDASTPRPPEASSSPPEGSQDRNTSWGVVQEPP
GRASRFLQSISWDPEDFEDAWKRPDALPGQSKRLAVPCKLEKMRILAHGELVLATAISSFTRHVFTCGRRGIKVWSLTGQVAEDRFPESH
LPIQTPGAFLRTCLLSSNSRSLLTGGYNLASVSVWDLAAPSLHVKEQLPCAGLNCQALDANLDANLAFASFTSGVVRIWDLRDQSVVRDL
KGYPDGVKSIVVKGYNIWTGGPDACLRCWDQRTIMKPLEYQFKSQIMSLSHSPQEDWVLLGMANGQQWLQSTSGSQRHMVGQKDSVILSV

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