FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>34553_34553_1_GPX3-SPARC_GPX3_chr5_150406580_ENST00000517973_SPARC_chr5_151047095_ENST00000231061_length(amino acids)=165AA_BP=1
MLLSQKVVVLIPLIQGDQDVRQWGAGPAGRTASVQGRCTCYSSSRSPGPAAPRGGLLPPGASHSHGSSSLCLMPKQPAHSSRAMYLSLSR

--------------------------------------------------------------