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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>34889_34889_1_GRK5-SUMF1_GRK5_chr10_121191039_ENST00000369108_SUMF1_chr3_4110429_ENST00000534863_length(amino acids)=289AA_BP=198
MPSDRDYCSLCDKQPIGRLLFRQFCETRPGLECYIQFLDSVAEYEVTPDEKLGEKGKEIMTKYLTPKSPVFIAQVGQDLVSQTEEKLLQK
PCKELFSACAQSVHEYLRGEPFHEYLDSMFFDRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRK
GESMALNEKQILEKVNSQFVSQEYYDPYFQDVASEMLRRHTASRWKAFSSLEPCCSIRRHQQYAAIERLTCGKFELRCASLRKIDCLNTN

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>34889_34889_2_GRK5-SUMF1_GRK5_chr10_121191039_ENST00000392870_SUMF1_chr3_4110429_ENST00000534863_length(amino acids)=375AA_BP=284
MLAPPAPAAAAAARAAAAAAAAPQALTAPPAGSVADRRLSMELENIVANTVLLKAREGGGGKRKGKSKKWKEILKFPHISQCEDLRRTID
RDYCSLCDKQPIGRLLFRQFCETRPGLECYIQFLDSVAEYEVTPDEKLGEKGKEIMTKYLTPKSPVFIAQVGQDLVSQTEEKLLQKPCKE
LFSACAQSVHEYLRGEPFHEYLDSMFFDRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESM
ALNEKQILEKVNSQFVSQEYYDPYFQDVASEMLRRHTASRWKAFSSLEPCCSIRRHQQYAAIERLTCGKFELRCASLRKIDCLNTNIACS

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