FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>35133_35133_1_GSTP1-ELP4_GSTP1_chr11_67354008_ENST00000398603_ELP4_chr11_31671663_ENST00000350638_length(amino acids)=144AA_BP=
MPPYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLYGKDQQEAALV

--------------------------------------------------------------

>35133_35133_2_GSTP1-ELP4_GSTP1_chr11_67354008_ENST00000398603_ELP4_chr11_31671663_ENST00000379163_length(amino acids)=144AA_BP=
MPPYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLYGKDQQEAALV

--------------------------------------------------------------

>35133_35133_3_GSTP1-ELP4_GSTP1_chr11_67354008_ENST00000398603_ELP4_chr11_31671663_ENST00000395934_length(amino acids)=189AA_BP=1
MIHIRQIPRLNNLICDESDVKDLAFKLKRKLFTIEAGVQWHDLGSRQPRLLGSSNSPASASLVAGITGAHHHTQLIFVFLVEMGFHHVGQ
AGLELLTSGDSSASASQSAGITGMSYRARPRALYFKENKSKVGARQLLETREEHLSSRLLILTQAERLCMGRRFFTAFHIFNELPCKGDC

--------------------------------------------------------------