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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>35136_35136_1_GSTP1-KRT14_GSTP1_chr11_67352630_ENST00000398603_KRT14_chr17_39739709_ENST00000167586_length(amino acids)=236AA_BP=21
MEFRRRSLRHHAALHRGLFPSSRPLRGPAHAAGRSGPELEGGGGDRGDVAGGLTQSLLPIRAAPQVPGRRPHPVPVQYHPASPGPHPWEA
ALVDMVNDGVEDLRCKYISLIYTNYKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIATYR

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>35136_35136_2_GSTP1-KRT14_GSTP1_chr11_67352630_ENST00000398606_KRT14_chr17_39739709_ENST00000167586_length(amino acids)=236AA_BP=21
MEFRRRSLRHHAALHRGLFPSSRPLRGPAHAAGRSGPELEGGGGDRGDVAGGLTQSLLPIRAAPQVPGRRPHPVPVQYHPASPGPHPWEA
ALVDMVNDGVEDLRCKYISLIYTNYKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIATYR

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