|
|||||||
|
 Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >36799_36799_1_HMGA1-ARIH2_HMGA1_chr6_34211295_ENST00000311487_ARIH2_chr3_49019092_ENST00000356401_length(amino acids)=234AA_BP=160 MGLRAGAISGAGAAPRRHPHLLPAAAAAEPGRSSAPSTAAPGNPERAPQAGGRARASQPSLFHLLLREGKMSESSSKSSQPLASKQEKDG TEKRGRGRPRKQPPVSPGTALVGSQKEPSEVPTPKRPRGRPKGSKNKGAAKTRKTTTTPGRKPRGRPKKLCRYTLQYTYPYAYYMESGPR -------------------------------------------------------------- >36799_36799_2_HMGA1-ARIH2_HMGA1_chr6_34211295_ENST00000311487_ARIH2_chr3_49019092_ENST00000449376_length(amino acids)=234AA_BP=160 MGLRAGAISGAGAAPRRHPHLLPAAAAAEPGRSSAPSTAAPGNPERAPQAGGRARASQPSLFHLLLREGKMSESSSKSSQPLASKQEKDG TEKRGRGRPRKQPPVSPGTALVGSQKEPSEVPTPKRPRGRPKGSKNKGAAKTRKTTTTPGRKPRGRPKKLCRYTLQYTYPYAYYMESGPR -------------------------------------------------------------- >36799_36799_3_HMGA1-ARIH2_HMGA1_chr6_34211295_ENST00000347617_ARIH2_chr3_49019092_ENST00000356401_length(amino acids)=225AA_BP= MFPMDWKLLEARARESLAYHCMPRCQAWGLAHLRSRGRAAEFRLAMYEASSSHRCPVHVAHSYGASTLPLSYLSLTLLPLLTPQMWTPLI NPNLISCPSPLRLDSTLVSAPSCLFITLRAPVKLEFTLPYSTALHSHVCFGGVRRSQNGGVGTFISVLYHNPGIYLWWGMIQPVLRERRA -------------------------------------------------------------- >36799_36799_4_HMGA1-ARIH2_HMGA1_chr6_34211295_ENST00000347617_ARIH2_chr3_49019092_ENST00000449376_length(amino acids)=185AA_BP=111 MGLRAGAISGAGAAPRRPSQPSLFHLLLREGKMSESSSKSSQPLASKQEKDGTEKRGRGRPRKQPPKEPSEVPTPKRPRGRPKGSKNKGA AKTRKTTTTPGRKPRGRPKKLCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADSYDRGDLENQMHIAEQRRRTLLK -------------------------------------------------------------- >36799_36799_5_HMGA1-ARIH2_HMGA1_chr6_34211295_ENST00000374116_ARIH2_chr3_49019092_ENST00000356401_length(amino acids)=225AA_BP= MFPMDWKLLEARARESLAYHCMPRCQAWGLAHLRSRGRAAEFRLAMYEASSSHRCPVHVAHSYGASTLPLSYLSLTLLPLLTPQMWTPLI NPNLISCPSPLRLDSTLVSAPSCLFITLRAPVKLEFTLPYSTALHSHVCFGGVRRSQNGGVGTFISVLYHNPGIYLWWGMIQPVLRERRA -------------------------------------------------------------- >36799_36799_6_HMGA1-ARIH2_HMGA1_chr6_34211295_ENST00000374116_ARIH2_chr3_49019092_ENST00000449376_length(amino acids)=184AA_BP=1 MKRGQFNMASTLVETKSEKRRKQKSTKRCCQCLSGVGPWLLPGVMKGRACSMQYGSRETLQPHLPHPGTSTSQLRCHGNLSAGFSSAAPL YASGSPSPLCHSCLHAPLSMRGFRSQPPAEPAGIQTASSWVRTPCNMHMGRCIAGCIDTVFWVCPLVSFLELWWFSGSWQHPCFCFPLVG -------------------------------------------------------------- >36799_36799_7_HMGA1-ARIH2_HMGA1_chr6_34211295_ENST00000401473_ARIH2_chr3_49019092_ENST00000356401_length(amino acids)=225AA_BP= MFPMDWKLLEARARESLAYHCMPRCQAWGLAHLRSRGRAAEFRLAMYEASSSHRCPVHVAHSYGASTLPLSYLSLTLLPLLTPQMWTPLI NPNLISCPSPLRLDSTLVSAPSCLFITLRAPVKLEFTLPYSTALHSHVCFGGVRRSQNGGVGTFISVLYHNPGIYLWWGMIQPVLRERRA -------------------------------------------------------------- >36799_36799_8_HMGA1-ARIH2_HMGA1_chr6_34211295_ENST00000401473_ARIH2_chr3_49019092_ENST00000449376_length(amino acids)=223AA_BP=149 MGLRAGAISGAGAAPRRHPHLLPAAAAAEPGRSSAPSTAAPGNPERAPQAGGRARASQPSLFHLLLREGKMSESSSKSSQPLASKQEKDG TEKRGRGRPRKQPPKEPSEVPTPKRPRGRPKGSKNKGAAKTRKTTTTPGRKPRGRPKKLCRYTLQYTYPYAYYMESGPRKKLFEYQQAQL -------------------------------------------------------------- >36799_36799_9_HMGA1-ARIH2_HMGA1_chr6_34211295_ENST00000447654_ARIH2_chr3_49019092_ENST00000356401_length(amino acids)=237AA_BP=163 MGGEHAAAAVSERLCSLPVSDPHLLPAAAAAEPGRSSAPSTAAPGNPERAPQAGGRARASQPSLFHLLLREGKMSESSSKSSQPLASKQE KDGTEKRGRGRPRKQPPVSPGTALVGSQKEPSEVPTPKRPRGRPKGSKNKGAAKTRKTTTTPGRKPRGRPKKLCRYTLQYTYPYAYYMES -------------------------------------------------------------- >36799_36799_10_HMGA1-ARIH2_HMGA1_chr6_34211295_ENST00000447654_ARIH2_chr3_49019092_ENST00000449376_length(amino acids)=237AA_BP=163 MGGEHAAAAVSERLCSLPVSDPHLLPAAAAAEPGRSSAPSTAAPGNPERAPQAGGRARASQPSLFHLLLREGKMSESSSKSSQPLASKQE KDGTEKRGRGRPRKQPPVSPGTALVGSQKEPSEVPTPKRPRGRPKGSKNKGAAKTRKTTTTPGRKPRGRPKKLCRYTLQYTYPYAYYMES -------------------------------------------------------------- |
Copyright 2023-PresentThe University of Texas Health Science Center at Houston (UTHealth)
Web File Viewing | Emergency Information
Campus Carry|Site Policies