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 Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >36825_36825_1_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000354636_CHMP1A_chr16_89713739_ENST00000397901_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_2_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000354636_CHMP1A_chr16_89713739_ENST00000535997_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_3_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000354636_CHMP1A_chr16_89713739_ENST00000550102_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_4_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000393577_CHMP1A_chr16_89713739_ENST00000397901_length(amino acids)=178AA_BP=66 MSARGEGAGQPSTSAQGQPAAPAPQKRGRGRPRKQQQEPTGEPSPKRPRGRPKGSKNKSPSKAAQKVTKNMAQVTKALDKALSTMDLQKV -------------------------------------------------------------- >36825_36825_5_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000393577_CHMP1A_chr16_89713739_ENST00000535997_length(amino acids)=178AA_BP=66 MSARGEGAGQPSTSAQGQPAAPAPQKRGRGRPRKQQQEPTGEPSPKRPRGRPKGSKNKSPSKAAQKVTKNMAQVTKALDKALSTMDLQKV -------------------------------------------------------------- >36825_36825_6_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000393577_CHMP1A_chr16_89713739_ENST00000550102_length(amino acids)=178AA_BP=66 MSARGEGAGQPSTSAQGQPAAPAPQKRGRGRPRKQQQEPTGEPSPKRPRGRPKGSKNKSPSKAAQKVTKNMAQVTKALDKALSTMDLQKV -------------------------------------------------------------- >36825_36825_7_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000393578_CHMP1A_chr16_89713739_ENST00000397901_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_8_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000393578_CHMP1A_chr16_89713739_ENST00000535997_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_9_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000393578_CHMP1A_chr16_89713739_ENST00000550102_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_10_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000403681_CHMP1A_chr16_89713739_ENST00000397901_length(amino acids)=292AA_BP= MPLASSQAPWLGGPPGLPPPHTFLPAQPPPLYPPTIRGGHSPHHHPLPKRKRVHAHTPHTLTLTHTHTHSSHLNLGAGTQKTSSPGSARL VQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLSLSLSLSLSLSLSLAGWGE EEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPPAPTHRRRRHRQRLLLSSS -------------------------------------------------------------- >36825_36825_11_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000403681_CHMP1A_chr16_89713739_ENST00000535997_length(amino acids)=292AA_BP= MPLASSQAPWLGGPPGLPPPHTFLPAQPPPLYPPTIRGGHSPHHHPLPKRKRVHAHTPHTLTLTHTHTHSSHLNLGAGTQKTSSPGSARL VQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLSLSLSLSLSLSLSLAGWGE EEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPPAPTHRRRRHRQRLLLSSS -------------------------------------------------------------- >36825_36825_12_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000403681_CHMP1A_chr16_89713739_ENST00000550102_length(amino acids)=292AA_BP= MPLASSQAPWLGGPPGLPPPHTFLPAQPPPLYPPTIRGGHSPHHHPLPKRKRVHAHTPHTLTLTHTHTHSSHLNLGAGTQKTSSPGSARL VQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLSLSLSLSLSLSLSLAGWGE EEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPPAPTHRRRRHRQRLLLSSS -------------------------------------------------------------- >36825_36825_13_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000425208_CHMP1A_chr16_89713739_ENST00000397901_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_14_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000425208_CHMP1A_chr16_89713739_ENST00000535997_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_15_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000425208_CHMP1A_chr16_89713739_ENST00000550102_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_16_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000536545_CHMP1A_chr16_89713739_ENST00000397901_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_17_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000536545_CHMP1A_chr16_89713739_ENST00000535997_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_18_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000536545_CHMP1A_chr16_89713739_ENST00000550102_length(amino acids)=220AA_BP= LNLGAGTQKTSSPGSARLVQDSGASSPSPSDSPVPPLPAPATLGGAVPPTTLSSACAPCPTLSRRSLPILLCFPTAQGTFNLNLFSLSLS LSLSLSLSLSLSLAGWGEEEEEFFPRLTFQGTQFTPSLFPFQAASEVLPVPATPDPNPREEPLRPQSLSSFSLASLLLLLPPPPPPPPPP -------------------------------------------------------------- >36825_36825_19_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000541363_CHMP1A_chr16_89713739_ENST00000397901_length(amino acids)=178AA_BP=66 MSARGEGAGQPSTSAQGQPAAPAPQKRGRGRPRKQQQEPTGEPSPKRPRGRPKGSKNKSPSKAAQKVTKNMAQVTKALDKALSTMDLQKV -------------------------------------------------------------- >36825_36825_20_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000541363_CHMP1A_chr16_89713739_ENST00000535997_length(amino acids)=178AA_BP=66 MSARGEGAGQPSTSAQGQPAAPAPQKRGRGRPRKQQQEPTGEPSPKRPRGRPKGSKNKSPSKAAQKVTKNMAQVTKALDKALSTMDLQKV -------------------------------------------------------------- >36825_36825_21_HMGA2-CHMP1A_HMGA2_chr12_66221867_ENST00000541363_CHMP1A_chr16_89713739_ENST00000550102_length(amino acids)=178AA_BP=66 MSARGEGAGQPSTSAQGQPAAPAPQKRGRGRPRKQQQEPTGEPSPKRPRGRPKGSKNKSPSKAAQKVTKNMAQVTKALDKALSTMDLQKV -------------------------------------------------------------- |
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