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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>36963_36963_1_HMGN3-NDUFB4_HMGN3_chr6_79944263_ENST00000275036_NDUFB4_chr3_120319958_ENST00000184266_length(amino acids)=102AA_BP=33
MQRQRQHPAAAPAVPVRCFTFCFTDIVIMPKRKENPALLRWAYARTINVYPNFRPTPKNSLMGALCGFGPLIFIYYIIKTERDRKEKLIQ

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>36963_36963_2_HMGN3-NDUFB4_HMGN3_chr6_79944263_ENST00000344726_NDUFB4_chr3_120319958_ENST00000184266_length(amino acids)=102AA_BP=33
MQRQRQHPAAAPAVPVRCFTFCFTDIVIMPKRKENPALLRWAYARTINVYPNFRPTPKNSLMGALCGFGPLIFIYYIIKTERDRKEKLIQ

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