FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use
Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>38424_38424_1_IFT46-MYH9_IFT46_chr11_118425962_ENST00000264020_MYH9_chr22_36681999_ENST00000216181_length(amino acids)=383AA_BP=1
MPCSPQHLVLFGKRGLRSLLVALCLGPGPVSLVSDSEQGRELEGDAAEEAKCPQQHLEGNGMGGRGGGQEEACSQQSQEGGERRAAGSGK
GRLWCLSVHPSQAAGEEAYSAGLASAPSALPSTSSSEPSPAPFRAIRRGTTNGRSPRLSLFFRELTSRFMASAVSVASSSSRCSFRREAL
ARWASSSASSSCRLSCFRRVDALSAWSLYCSAFLRSSSTCSSTSFSFFSVRRTCLQAAWRSLVSLSSCSSSCAILASRAVMEALYLDLTV
PSISCSLTLSSLFWRSSCCRAFSFFWAWLRSRFRSVLIWSICRLAFFSRSLISSVLPCSSSSSSSSWAMRASRRRFSSNARAPLPLLLAI

--------------------------------------------------------------

>38424_38424_2_IFT46-MYH9_IFT46_chr11_118425962_ENST00000264021_MYH9_chr22_36681999_ENST00000216181_length(amino acids)=383AA_BP=1
MPCSPQHLVLFGKRGLRSLLVALCLGPGPVSLVSDSEQGRELEGDAAEEAKCPQQHLEGNGMGGRGGGQEEACSQQSQEGGERRAAGSGK
GRLWCLSVHPSQAAGEEAYSAGLASAPSALPSTSSSEPSPAPFRAIRRGTTNGRSPRLSLFFRELTSRFMASAVSVASSSSRCSFRREAL
ARWASSSASSSCRLSCFRRVDALSAWSLYCSAFLRSSSTCSSTSFSFFSVRRTCLQAAWRSLVSLSSCSSSCAILASRAVMEALYLDLTV
PSISCSLTLSSLFWRSSCCRAFSFFWAWLRSRFRSVLIWSICRLAFFSRSLISSVLPCSSSSSSSSWAMRASRRRFSSNARAPLPLLLAI

--------------------------------------------------------------

>38424_38424_3_IFT46-MYH9_IFT46_chr11_118425962_ENST00000530872_MYH9_chr22_36681999_ENST00000216181_length(amino acids)=383AA_BP=1
MPCSPQHLVLFGKRGLRSLLVALCLGPGPVSLVSDSEQGRELEGDAAEEAKCPQQHLEGNGMGGRGGGQEEACSQQSQEGGERRAAGSGK
GRLWCLSVHPSQAAGEEAYSAGLASAPSALPSTSSSEPSPAPFRAIRRGTTNGRSPRLSLFFRELTSRFMASAVSVASSSSRCSFRREAL
ARWASSSASSSCRLSCFRRVDALSAWSLYCSAFLRSSSTCSSTSFSFFSVRRTCLQAAWRSLVSLSSCSSSCAILASRAVMEALYLDLTV
PSISCSLTLSSLFWRSSCCRAFSFFWAWLRSRFRSVLIWSICRLAFFSRSLISSVLPCSSSSSSSSWAMRASRRRFSSNARAPLPLLLAI

--------------------------------------------------------------