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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>3928_3928_1_ALDH9A1-NME7_ALDH9A1_chr1_165651344_ENST00000354775_NME7_chr1_169206925_ENST00000367811_length(amino acids)=357AA_BP=232
MPLKSPRTDPAAPPLPRPRPSRGPSASAAELRPPLMFLRAGLAALSPLLRSLRPSPVAAMSTGTFVVSQPLNYRGGARVEPADASGTEKA
FEPATGRVIATFTCSGEKEVNLAVQNAKAAFKIWSQKSGMERCRILLEAARIIREREDEIATMECINNGKSIFEARLDIDISWQCLEYYA
GLAASMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIASWKSAPALACGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFYEVYK

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>3928_3928_2_ALDH9A1-NME7_ALDH9A1_chr1_165651344_ENST00000354775_NME7_chr1_169206925_ENST00000472647_length(amino acids)=357AA_BP=232
MPLKSPRTDPAAPPLPRPRPSRGPSASAAELRPPLMFLRAGLAALSPLLRSLRPSPVAAMSTGTFVVSQPLNYRGGARVEPADASGTEKA
FEPATGRVIATFTCSGEKEVNLAVQNAKAAFKIWSQKSGMERCRILLEAARIIREREDEIATMECINNGKSIFEARLDIDISWQCLEYYA
GLAASMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIASWKSAPALACGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFYEVYK

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