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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>40526_40526_1_ITGB3-DYNLRB1_ITGB3_chr17_45331306_ENST00000559488_DYNLRB1_chr20_33122431_ENST00000357156_length(amino acids)=123AA_BP=1
MTLTFLGGIKLRNDTGSQESGLFGWILNHNQEIVFIWCNHNFIFLGANSKEGEIVLGVDVTHGAPCLQDEAVHEAGILGGGGVVHGALDG

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>40526_40526_2_ITGB3-DYNLRB1_ITGB3_chr17_45331306_ENST00000571680_DYNLRB1_chr20_33122431_ENST00000357156_length(amino acids)=121AA_BP=1
MTLTFLGGIKLRNDTGSQESGLFGWILNHNQEIVFIWCNHNFIFLGANSKEGEIVLGVDVTHGAPCLQDEAVHEAGILGGGGVVHGALDG

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