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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>44493_44493_1_LETMD1-HTRA4_LETMD1_chr12_51442261_ENST00000262055_HTRA4_chr8_38840471_ENST00000302495_length(amino acids)=126AA_BP=41
MALSRVCWARSAVWGSAVTPGHFVTRRLQLGRSGLAWGAPRLSEELKMHYPDFPDVSSGVYVCKVVEGTAAQSSGLRDHDVIVNINGKPI

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>44493_44493_2_LETMD1-HTRA4_LETMD1_chr12_51442261_ENST00000380123_HTRA4_chr8_38840471_ENST00000302495_length(amino acids)=126AA_BP=41
MALSRVCWARSAVWGSAVTPGHFVTRRLQLGRSGLAWGAPRLSEELKMHYPDFPDVSSGVYVCKVVEGTAAQSSGLRDHDVIVNINGKPI

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>44493_44493_3_LETMD1-HTRA4_LETMD1_chr12_51442261_ENST00000418425_HTRA4_chr8_38840471_ENST00000302495_length(amino acids)=126AA_BP=41
MALSRVCWARSAVWGSAVTPGHFVTRRLQLGRSGLAWGAPRLSEELKMHYPDFPDVSSGVYVCKVVEGTAAQSSGLRDHDVIVNINGKPI

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>44493_44493_4_LETMD1-HTRA4_LETMD1_chr12_51442261_ENST00000547008_HTRA4_chr8_38840471_ENST00000302495_length(amino acids)=126AA_BP=41
MALSRVCWARSAVWGSAVTPGHFVTRRLQLGRSGLAWGAPRLSEELKMHYPDFPDVSSGVYVCKVVEGTAAQSSGLRDHDVIVNINGKPI

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>44493_44493_5_LETMD1-HTRA4_LETMD1_chr12_51442261_ENST00000552739_HTRA4_chr8_38840471_ENST00000302495_length(amino acids)=126AA_BP=41
MALSRVCWARSAVWGSAVTPGHFVTRRLQLGRSGLAWGAPRLSEELKMHYPDFPDVSSGVYVCKVVEGTAAQSSGLRDHDVIVNINGKPI

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