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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>45843_45843_1_LMTK2-FAM3C_LMTK2_chr7_97736592_ENST00000297293_FAM3C_chr7_121012193_ENST00000359943_length(amino acids)=314AA_BP=0
MHPSISTTSGHPSYLFVSLLFFMCCSKGLFVLMPFPPQKTQLSLKPRLVIDVLPKSAMSRRASSLSLVAPSSYVPIKTIVPSCMAFRNSI
NGATSPPHMSKYLVSNTSPVFPFAKATLIPLPTLFLTPLIKTLSSRQILGPTTLAAPLAILKAKCFSGQAFEIPHLYLGGFVERAAVSNA
DLAAPVCGSGAAPALPAIRRTSSSSSSLRRNAGGPGISPTARLRGRPSSRLPSVRPFARQSILPPSAASVAPAPVAPEHTLLLPNLGPAP

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