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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>52521_52521_1_MECP2-DNASE1L1_MECP2_chrX_153357642_ENST00000303391_DNASE1L1_chrX_153631963_ENST00000369809_length(amino acids)=207AA_BP=8
MVAGMLGLRSHKTQVLSSYVYNDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILLGDFNA
DCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLS

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>52521_52521_2_MECP2-DNASE1L1_MECP2_chrX_153357642_ENST00000303391_DNASE1L1_chrX_153631963_ENST00000393638_length(amino acids)=207AA_BP=8
MVAGMLGLRSHKTQVLSSYVYNDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILLGDFNA
DCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLS

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>52521_52521_3_MECP2-DNASE1L1_MECP2_chrX_153357642_ENST00000407218_DNASE1L1_chrX_153631963_ENST00000369809_length(amino acids)=207AA_BP=8
MVAGMLGLRSHKTQVLSSYVYNDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILLGDFNA
DCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLS

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>52521_52521_4_MECP2-DNASE1L1_MECP2_chrX_153357642_ENST00000407218_DNASE1L1_chrX_153631963_ENST00000393638_length(amino acids)=207AA_BP=8
MVAGMLGLRSHKTQVLSSYVYNDEDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILLGDFNA
DCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLS

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