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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>53978_53978_1_MITD1-CLNS1A_MITD1_chr2_99790377_ENST00000289359_CLNS1A_chr11_77336115_ENST00000263309_length(amino acids)=225AA_BP=109
MTTSRKRSRPAQLHPGLRRRRTSRIMAKSGLRQDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKI
SKYMDRAENIKKYLDQEKEVEAMFTAMCECQALHPDPEDEDSDDYDGEEYDVEAHEQGQGDIPTFYTYEEGLSHLTAEGQATLERLEGML

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>53978_53978_2_MITD1-CLNS1A_MITD1_chr2_99790377_ENST00000289359_CLNS1A_chr11_77336115_ENST00000525064_length(amino acids)=167AA_BP=109
MTTSRKRSRPAQLHPGLRRRRTSRIMAKSGLRQDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKI

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>53978_53978_3_MITD1-CLNS1A_MITD1_chr2_99790377_ENST00000289359_CLNS1A_chr11_77336115_ENST00000525428_length(amino acids)=225AA_BP=109
MTTSRKRSRPAQLHPGLRRRRTSRIMAKSGLRQDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKI
SKYMDRAENIKKYLDQEKEVEAMFTAMCECQALHPDPEDEDSDDYDGEEYDVEAHEQGQGDIPTFYTYEEGLSHLTAEGQATLERLEGML

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