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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>64638_64638_1_PGM2L1-UVRAG_PGM2L1_chr11_74109096_ENST00000298198_UVRAG_chr11_75694431_ENST00000356136_length(amino acids)=530AA_BP=64
MVSEPQATPHPNSVSSPAPGPYACLVAMAENTEGDLNSNLLHAPYHTGDPQLDTAIGQWLRWDKKKKSECLQLKILVLQNELERQKKALG
REVALLHKQQIALQDKGSAFSAEHLKLQLQKESLNELRKECTAKRELFLKTNAQLTIRCRQLLSELSYIYPIDLNEHKDYFVCGVKLPNS
EDFQAKDDGSIAVALGYTAHLVSMISFFLQVPLRYPIIHKGSRSTIKDNINDKLTEKEREFPLYPKGGEKLQFDYGVYLLNKNIAQLRYQ
HGLGTPDLRQTLPNLKNFMEHGLMVRCDRHHTSSAIPVPKRQSSIFGGADVGFSGGIPSPDKGHRKRASSENERLQYKTPPPSYNSALAQ
PVTTVPSMGETERKITSLSSSLDTSLDFSKENKKKGEDLVGSLNGGHANVHPSQEQGEALSGHRATVNGTLLPSEQAGSASVQLPGEFHP

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>64638_64638_2_PGM2L1-UVRAG_PGM2L1_chr11_74109096_ENST00000298198_UVRAG_chr11_75694431_ENST00000528420_length(amino acids)=530AA_BP=64
MVSEPQATPHPNSVSSPAPGPYACLVAMAENTEGDLNSNLLHAPYHTGDPQLDTAIGQWLRWDKKKKSECLQLKILVLQNELERQKKALG
REVALLHKQQIALQDKGSAFSAEHLKLQLQKESLNELRKECTAKRELFLKTNAQLTIRCRQLLSELSYIYPIDLNEHKDYFVCGVKLPNS
EDFQAKDDGSIAVALGYTAHLVSMISFFLQVPLRYPIIHKGSRSTIKDNINDKLTEKEREFPLYPKGGEKLQFDYGVYLLNKNIAQLRYQ
HGLGTPDLRQTLPNLKNFMEHGLMVRCDRHHTSSAIPVPKRQSSIFGGADVGFSGGIPSPDKGHRKRASSENERLQYKTPPPSYNSALAQ
PVTTVPSMGETERKITSLSSSLDTSLDFSKENKKKGEDLVGSLNGGHANVHPSQEQGEALSGHRATVNGTLLPSEQAGSASVQLPGEFHP

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