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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>64675_64675_1_PHACTR1-BCL11A_PHACTR1_chr6_12750022_ENST00000332995_BCL11A_chr2_60679801_ENST00000356842_length(amino acids)=113AA_BP=79
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI

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>64675_64675_2_PHACTR1-BCL11A_PHACTR1_chr6_12750022_ENST00000332995_BCL11A_chr2_60679801_ENST00000359629_length(amino acids)=113AA_BP=79
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI

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>64675_64675_3_PHACTR1-BCL11A_PHACTR1_chr6_12750022_ENST00000332995_BCL11A_chr2_60679801_ENST00000538214_length(amino acids)=113AA_BP=79
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI

--------------------------------------------------------------

>64675_64675_4_PHACTR1-BCL11A_PHACTR1_chr6_12750022_ENST00000379348_BCL11A_chr2_60679801_ENST00000356842_length(amino acids)=148AA_BP=114
MIACEFNSICSREYKARKGWCSSVFSQNSVFGTSRMDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDI

--------------------------------------------------------------

>64675_64675_5_PHACTR1-BCL11A_PHACTR1_chr6_12750022_ENST00000379348_BCL11A_chr2_60679801_ENST00000359629_length(amino acids)=148AA_BP=114
MIACEFNSICSREYKARKGWCSSVFSQNSVFGTSRMDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDI

--------------------------------------------------------------

>64675_64675_6_PHACTR1-BCL11A_PHACTR1_chr6_12750022_ENST00000379348_BCL11A_chr2_60679801_ENST00000538214_length(amino acids)=148AA_BP=114
MIACEFNSICSREYKARKGWCSSVFSQNSVFGTSRMDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDI

--------------------------------------------------------------

>64675_64675_7_PHACTR1-BCL11A_PHACTR1_chr6_12750022_ENST00000379350_BCL11A_chr2_60679801_ENST00000356842_length(amino acids)=130AA_BP=96
MQCSSVFSQNSVFGTSRMDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLA

--------------------------------------------------------------

>64675_64675_8_PHACTR1-BCL11A_PHACTR1_chr6_12750022_ENST00000379350_BCL11A_chr2_60679801_ENST00000359629_length(amino acids)=130AA_BP=96
MQCSSVFSQNSVFGTSRMDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLA

--------------------------------------------------------------

>64675_64675_9_PHACTR1-BCL11A_PHACTR1_chr6_12750022_ENST00000379350_BCL11A_chr2_60679801_ENST00000538214_length(amino acids)=130AA_BP=96
MQCSSVFSQNSVFGTSRMDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLA

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