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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>65990_65990_1_PLCB3-PGA5_PLCB3_chr11_64023088_ENST00000279230_PGA5_chr11_61013418_ENST00000312403_length(amino acids)=474AA_BP=238
MAGGRALTPRGRSGPRGGSSGAVGPRQGSVGPRPAPGRAMAGAQPGVHALQLEPPTVVETLRRGSKFIKWDEETSSRNLVTLRVDPNGFF
LYWTGPNMEVDTLDISSIRDTRTGRYARLPKDPKIREVLGFGGPDARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMN
ILAQNASRNTFLRKAYTKLKLQVNQDGRIPVKNILKMFSADKKRVETALESCGLKFNRVGGISDTNQIFGLSETEPGSFLYYAPFDGILG
LAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADDKSGSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNGETIACAEGCQA
IVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQSEGSCISGFQGMNVPTESGELWILG

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>65990_65990_2_PLCB3-PGA5_PLCB3_chr11_64023088_ENST00000325234_PGA5_chr11_61013418_ENST00000312403_length(amino acids)=368AA_BP=132
MAGAQPGVHALQLEPPTVVETLRRGSKFIKWDEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMNILAQNASRNTFLRKAY
TKLKLQVNQDGRIPVKNILKMFSADKKRVETALESCGLKFNRVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFD
NIWNQGLVSQDLFSVYLSADDKSGSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNGETIACAEGCQAIVDTGTSLLTGPTSPI
ANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQSEGSCISGFQGMNVPTESGELWILGDVFIRQYFTVFDRANN

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>65990_65990_3_PLCB3-PGA5_PLCB3_chr11_64023088_ENST00000540288_PGA5_chr11_61013418_ENST00000312403_length(amino acids)=468AA_BP=232
MTPRGRSGPRGGSSGAVGPRQGSVGPRPAPGRAMAGAQPGVHALQLEPPTVVETLRRGSKFIKWDEETSSRNLVTLRVDPNGFFLYWTGP
NMEVDTLDISSIRDTRTGRYARLPKDPKIREVLGFGGPDARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMNILAQNA
SRNTFLRKAYTKLKLQVNQDGRIPVKNILKMFSADKKRVETALESCGLKFNRVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSI
SSSGATPVFDNIWNQGLVSQDLFSVYLSADDKSGSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITVDSITMNGETIACAEGCQAIVDTGT
SLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQSEGSCISGFQGMNVPTESGELWILGDVFIRQ

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