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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>67935_67935_1_PPP1R7-PLK1_PPP1R7_chr2_242093019_ENST00000234038_PLK1_chr16_23700558_ENST00000300093_length(amino acids)=256AA_BP=76
MRGLRRQIPERGRAANMAAERGAGQQQSQEMMEVDRRVESEESGDEEGKKHSSGIVADLSEQSLKDGEERGEEDPEGYQLCDNSVGVLFN
DSTRLILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSN

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>67935_67935_2_PPP1R7-PLK1_PPP1R7_chr2_242093019_ENST00000404405_PLK1_chr16_23700558_ENST00000300093_length(amino acids)=256AA_BP=76
MRGLRRQIPERGRAANMAAERGAGQQQSQEMMEVDRRVESEESGDEEGKKHSSGIVADLSEQSLKDGEERGEEDPEGYQLCDNSVGVLFN
DSTRLILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSN

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>67935_67935_3_PPP1R7-PLK1_PPP1R7_chr2_242093019_ENST00000406106_PLK1_chr16_23700558_ENST00000300093_length(amino acids)=240AA_BP=60
MAAERGAGQQQSQEMMEVDRRVESEESGDEEGKKHSSGIVADLSEQSLKDGEERGEEDPEGYQLCDNSVGVLFNDSTRLILYNDGDSLQY
IERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSNGSVQINFFQDHTKLIL

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>67935_67935_4_PPP1R7-PLK1_PPP1R7_chr2_242093019_ENST00000407025_PLK1_chr16_23700558_ENST00000300093_length(amino acids)=256AA_BP=76
MRGLRRQIPERGRAANMAAERGAGQQQSQEMMEVDRRVESEESGDEEGKKHSSGIVADLSEQSLKDGEERGEEDPEGYQLCDNSVGVLFN
DSTRLILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSN

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