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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>68020_68020_1_PPP2R2C-CTBP1_PPP2R2C_chr4_6349573_ENST00000507294_CTBP1_chr4_1207393_ENST00000290921_length(amino acids)=262AA_BP=
MREADTLRPPQLMEVSADIISTVEFNHTGELLATGDKGGRVVIFQREPESKNAPHSQGEYDVYSTFQSHEPEFDYLKSLEIEEKINKIKW
LPQQNAAHSLLSTNDKTIKLWKITERDKRPEGYNLKDEEGKLKDLSTVTSLQVPVLKPMDLMVEVSPRRIFANGHTYHINSISVNSDCET

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>68020_68020_2_PPP2R2C-CTBP1_PPP2R2C_chr4_6349573_ENST00000507294_CTBP1_chr4_1207393_ENST00000382952_length(amino acids)=262AA_BP=
MREADTLRPPQLMEVSADIISTVEFNHTGELLATGDKGGRVVIFQREPESKNAPHSQGEYDVYSTFQSHEPEFDYLKSLEIEEKINKIKW
LPQQNAAHSLLSTNDKTIKLWKITERDKRPEGYNLKDEEGKLKDLSTVTSLQVPVLKPMDLMVEVSPRRIFANGHTYHINSISVNSDCET

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>68020_68020_3_PPP2R2C-CTBP1_PPP2R2C_chr4_6349573_ENST00000515571_CTBP1_chr4_1207393_ENST00000290921_length(amino acids)=259AA_BP=
MSITKTLMGKRDTADIISTVEFNHTGELLATGDKGGRVVIFQREPESKNAPHSQGEYDVYSTFQSHEPEFDYLKSLEIEEKINKIKWLPQ
QNAAHSLLSTNDKTIKLWKITERDKRPEGYNLKDEEGKLKDLSTVTSLQVPVLKPMDLMVEVSPRRIFANGHTYHINSISVNSDCETYMS

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>68020_68020_4_PPP2R2C-CTBP1_PPP2R2C_chr4_6349573_ENST00000515571_CTBP1_chr4_1207393_ENST00000382952_length(amino acids)=259AA_BP=
MSITKTLMGKRDTADIISTVEFNHTGELLATGDKGGRVVIFQREPESKNAPHSQGEYDVYSTFQSHEPEFDYLKSLEIEEKINKIKWLPQ
QNAAHSLLSTNDKTIKLWKITERDKRPEGYNLKDEEGKLKDLSTVTSLQVPVLKPMDLMVEVSPRRIFANGHTYHINSISVNSDCETYMS

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