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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>68186_68186_1_PPP4R1-ITGB6_PPP4R1_chr18_9614224_ENST00000400555_ITGB6_chr2_160968710_ENST00000283249_length(amino acids)=145AA_BP=18
MADLSLLQEDLQEDADGYFSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILLIGVVLLCIWKLL

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>68186_68186_2_PPP4R1-ITGB6_PPP4R1_chr18_9614224_ENST00000400556_ITGB6_chr2_160968710_ENST00000283249_length(amino acids)=145AA_BP=18
MADLSLLQEDLQEDADGYFSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILLIGVVLLCIWKLL

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