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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>68339_68339_1_PPTC7-IGF1_PPTC7_chr12_111020614_ENST00000354300_IGF1_chr12_102869577_ENST00000337514_length(amino acids)=176AA_BP=
MVCIFTEHVRGTVPGHEARVVPVARALLEEALTEVLPEAAAGRHQSVVAAAAAAGPGVGLREAAEHGAGHQPPVREDREHRRRRPPEEAG

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>68339_68339_2_PPTC7-IGF1_PPTC7_chr12_111020614_ENST00000354300_IGF1_chr12_102869577_ENST00000456098_length(amino acids)=176AA_BP=
MVCIFTEHVRGTVPGHEARVVPVARALLEEALTEVLPEAAAGRHQSVVAAAAAAGPGVGLREAAEHGAGHQPPVREDREHRRRRPPEEAG

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