FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>68429_68429_1_PRDM11-FOLH1_PRDM11_chr11_45204674_ENST00000263765_FOLH1_chr11_49168497_ENST00000340334_length(amino acids)=217AA_BP=196
MLKMAEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKL
KGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYE

--------------------------------------------------------------

>68429_68429_2_PRDM11-FOLH1_PRDM11_chr11_45204674_ENST00000263765_FOLH1_chr11_49168497_ENST00000533034_length(amino acids)=217AA_BP=196
MLKMAEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKL
KGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYE

--------------------------------------------------------------

>68429_68429_3_PRDM11-FOLH1_PRDM11_chr11_45204674_ENST00000424263_FOLH1_chr11_49168497_ENST00000340334_length(amino acids)=183AA_BP=162
MTENMKECLAQTNAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSAGFFSWLACHLCSKQPQQVCRGVIP

--------------------------------------------------------------

>68429_68429_4_PRDM11-FOLH1_PRDM11_chr11_45204674_ENST00000424263_FOLH1_chr11_49168497_ENST00000533034_length(amino acids)=183AA_BP=162
MTENMKECLAQTNAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKLKGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNH
GPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSAGFFSWLACHLCSKQPQQVCRGVIP

--------------------------------------------------------------

>68429_68429_5_PRDM11-FOLH1_PRDM11_chr11_45204674_ENST00000530656_FOLH1_chr11_49168497_ENST00000340334_length(amino acids)=217AA_BP=196
MLKMAEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKL
KGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYE

--------------------------------------------------------------

>68429_68429_6_PRDM11-FOLH1_PRDM11_chr11_45204674_ENST00000530656_FOLH1_chr11_49168497_ENST00000533034_length(amino acids)=217AA_BP=196
MLKMAEPIASLMIVECRACLRCSPLFLYQREKDRMTENMKECLAQTNAAVGDMVTVVKTEVCSPLRDQEYGQPCSRRPDSSAMEVEPKKL
KGKRDLIVPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYE

--------------------------------------------------------------