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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>68723_68723_1_PRKCA-RGS9_PRKCA_chr17_64637584_ENST00000413366_RGS9_chr17_63221120_ENST00000443584_length(amino acids)=171AA_BP=1
MDFNRGSCWPTSPRGCTLPWDTAGHLGESLAKTGEARQPRLRNLLKDRAMRALGGALGRLRGQEVSREASLLSVTEGPRGAMDPLHSPFC

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>68723_68723_2_PRKCA-RGS9_PRKCA_chr17_64637588_ENST00000413366_RGS9_chr17_63221120_ENST00000443584_length(amino acids)=171AA_BP=1
MDFNRGSCWPTSPRGCTLPWDTAGHLGESLAKTGEARQPRLRNLLKDRAMRALGGALGRLRGQEVSREASLLSVTEGPRGAMDPLHSPFC

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