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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>68751_68751_1_PRKCE-GPR126_PRKCE_chr2_46070202_ENST00000306156_GPR126_chr6_142758571_ENST00000230173_length(amino acids)=252AA_BP=137
MVVFNGLLKIKICEAVSLKPTAWSLRHAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNGRKIELAVFHDAPIG
YDDFVANCTIQFEELLQNGSRHFEDWIDLEPEGRVYVIIDLSGSSGEGLFIFIFHCAMKENVQKQWRQHLCCGRFRLADNSDWSKTATNI

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>68751_68751_2_PRKCE-GPR126_PRKCE_chr2_46070202_ENST00000306156_GPR126_chr6_142758571_ENST00000296932_length(amino acids)=252AA_BP=137
MVVFNGLLKIKICEAVSLKPTAWSLRHAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNGRKIELAVFHDAPIG
YDDFVANCTIQFEELLQNGSRHFEDWIDLEPEGRVYVIIDLSGSSGEGLFIFIFHCAMKENVQKQWRQHLCCGRFRLADNSDWSKTATNI

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>68751_68751_3_PRKCE-GPR126_PRKCE_chr2_46070202_ENST00000306156_GPR126_chr6_142758571_ENST00000367608_length(amino acids)=281AA_BP=137
MVVFNGLLKIKICEAVSLKPTAWSLRHAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNGRKIELAVFHDAPIG
YDDFVANCTIQFEELLQNGSRHFEDWIDLEPEGRVYVIIDLSGSSGEGLFIFIFHCAMKENVQKQWRQHLCCGRFRLADNSDWSKTATNI
IKKSSDNLGKSLSSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQTSIIPVHQVIDKVKGYCNAHSDNFYKNII

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>68751_68751_4_PRKCE-GPR126_PRKCE_chr2_46070202_ENST00000306156_GPR126_chr6_142758571_ENST00000367609_length(amino acids)=281AA_BP=137
MVVFNGLLKIKICEAVSLKPTAWSLRHAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNGRKIELAVFHDAPIG
YDDFVANCTIQFEELLQNGSRHFEDWIDLEPEGRVYVIIDLSGSSGEGLFIFIFHCAMKENVQKQWRQHLCCGRFRLADNSDWSKTATNI
IKKSSDNLGKSLSSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQTSIIPVHQVIDKVKGYCNAHSDNFYKNII

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