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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>71913_71913_1_RALGAPA1-VWA5A_RALGAPA1_chr14_36231915_ENST00000307138_VWA5A_chr11_124007280_ENST00000456829_length(amino acids)=416AA_BP=136
MGAGCGSGSGSGSDRMFSKKPHGDVKKSTQKVLDTKKDALTRLKHLRIVIENAESIDLKQFFDQHFSHIYYVFFENFVTIEASLKQKGHK
SQREELDAILFIFEKILQLLPERIHQRWQFHSIGLILKKLLHTGNSLKAAETTGEVCLKYTLQGKTFEDKVTFPLQPKPDVNLTIHRLAA
KSLLQTKDMGLRETPASDKKDALNLSLESGVISSFTAFIAINKELNKPVQGPLAHRDVPRPILLGASAPLKIKCQSGFRKALHSDRPPSA
SQPRGELMCYKAKTFQMDDYSLCGLISHKDQHSPGFGENHLVQLIYHQNANGSWDLNEDLAKILGMSLEEIMAAQPAELVDSSGWATILA

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