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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>72332_72332_1_RARB-FGF12_RARB_chr3_25502832_ENST00000330688_FGF12_chr3_191888445_ENST00000264730_length(amino acids)=216AA_BP=111
MQTFSAREIMFDCMDVLSVSPGQILDFYTASPSSCMLQEKALKACFSGLTQTEWQHRHTAQSIETQSTSSEELVPSPPSPLPPPRVYKPC
FVCQDKSSGYHYGVSACEGCKDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCM

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>72332_72332_2_RARB-FGF12_RARB_chr3_25502832_ENST00000330688_FGF12_chr3_191888445_ENST00000430714_length(amino acids)=216AA_BP=111
MQTFSAREIMFDCMDVLSVSPGQILDFYTASPSSCMLQEKALKACFSGLTQTEWQHRHTAQSIETQSTSSEELVPSPPSPLPPPRVYKPC
FVCQDKSSGYHYGVSACEGCKDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCM

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>72332_72332_3_RARB-FGF12_RARB_chr3_25502832_ENST00000330688_FGF12_chr3_191888445_ENST00000445105_length(amino acids)=216AA_BP=111
MQTFSAREIMFDCMDVLSVSPGQILDFYTASPSSCMLQEKALKACFSGLTQTEWQHRHTAQSIETQSTSSEELVPSPPSPLPPPRVYKPC
FVCQDKSSGYHYGVSACEGCKDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCM

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>72332_72332_4_RARB-FGF12_RARB_chr3_25502832_ENST00000330688_FGF12_chr3_191888445_ENST00000450716_length(amino acids)=216AA_BP=111
MQTFSAREIMFDCMDVLSVSPGQILDFYTASPSSCMLQEKALKACFSGLTQTEWQHRHTAQSIETQSTSSEELVPSPPSPLPPPRVYKPC
FVCQDKSSGYHYGVSACEGCKDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCM

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>72332_72332_5_RARB-FGF12_RARB_chr3_25502832_ENST00000330688_FGF12_chr3_191888445_ENST00000454309_length(amino acids)=216AA_BP=111
MQTFSAREIMFDCMDVLSVSPGQILDFYTASPSSCMLQEKALKACFSGLTQTEWQHRHTAQSIETQSTSSEELVPSPPSPLPPPRVYKPC
FVCQDKSSGYHYGVSACEGCKDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCM

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>72332_72332_6_RARB-FGF12_RARB_chr3_25502832_ENST00000404969_FGF12_chr3_191888445_ENST00000264730_length(amino acids)=214AA_BP=109
MTTSGHACPVPAVNGHMTHYPATPYPLLFPPVIGGLSLPPLHGLHGHPPPSGCSTPSPATIETQSTSSEELVPSPPSPLPPPRVYKPCFV
CQDKSSGYHYGVSACEGCKDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYR

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>72332_72332_7_RARB-FGF12_RARB_chr3_25502832_ENST00000404969_FGF12_chr3_191888445_ENST00000430714_length(amino acids)=214AA_BP=109
MTTSGHACPVPAVNGHMTHYPATPYPLLFPPVIGGLSLPPLHGLHGHPPPSGCSTPSPATIETQSTSSEELVPSPPSPLPPPRVYKPCFV
CQDKSSGYHYGVSACEGCKDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYR

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>72332_72332_8_RARB-FGF12_RARB_chr3_25502832_ENST00000404969_FGF12_chr3_191888445_ENST00000445105_length(amino acids)=214AA_BP=109
MTTSGHACPVPAVNGHMTHYPATPYPLLFPPVIGGLSLPPLHGLHGHPPPSGCSTPSPATIETQSTSSEELVPSPPSPLPPPRVYKPCFV
CQDKSSGYHYGVSACEGCKDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYR

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>72332_72332_9_RARB-FGF12_RARB_chr3_25502832_ENST00000404969_FGF12_chr3_191888445_ENST00000450716_length(amino acids)=214AA_BP=109
MTTSGHACPVPAVNGHMTHYPATPYPLLFPPVIGGLSLPPLHGLHGHPPPSGCSTPSPATIETQSTSSEELVPSPPSPLPPPRVYKPCFV
CQDKSSGYHYGVSACEGCKDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYR

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>72332_72332_10_RARB-FGF12_RARB_chr3_25502832_ENST00000404969_FGF12_chr3_191888445_ENST00000454309_length(amino acids)=214AA_BP=109
MTTSGHACPVPAVNGHMTHYPATPYPLLFPPVIGGLSLPPLHGLHGHPPPSGCSTPSPATIETQSTSSEELVPSPPSPLPPPRVYKPCFV
CQDKSSGYHYGVSACEGCKDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYR

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